Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5043 84.2 3e-11
>seq5043
Length=14830
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 179935 GCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCA 179994
||||||| |||||| | ||| ||||| ||||| || ||||| || |||||||||
Sbjct 2264 GCATCTCTAACATTTAAAAGCTTTCCACGAAGAGGAAAAACACCATAAAAATCACGACCG 2205
Query 179995 ACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 180054
| || | ||||||||| || | || || || ||||| || || || | ||||||
Sbjct 2204 ATAACTCCCAAACCAGCAACAGCCAAAGTTTTGGCTGAATCTCCTTCAGTTAGAATGAGC 2145
Query 180055 GTACACTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113
||||| || | ||| | || || || | |||||| || ||||| |||| || |||
Sbjct 2144 GTACATTTACGAGAATTACGAGTTCCAGCTTCGTTCGCATCTTCCAATTTGGCAACACC 2086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618232693393760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |