Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5043 84.2 3e-11 >seq5043 Length=14830 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 179935 GCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCA 179994 ||||||| |||||| | ||| ||||| ||||| || ||||| || ||||||||| Sbjct 2264 GCATCTCTAACATTTAAAAGCTTTCCACGAAGAGGAAAAACACCATAAAAATCACGACCG 2205 Query 179995 ACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 180054 | || | ||||||||| || | || || || ||||| || || || | |||||| Sbjct 2204 ATAACTCCCAAACCAGCAACAGCCAAAGTTTTGGCTGAATCTCCTTCAGTTAGAATGAGC 2145 Query 180055 GTACACTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113 ||||| || | ||| | || || || | |||||| || ||||| |||| || ||| Sbjct 2144 GTACATTTACGAGAATTACGAGTTCCAGCTTCGTTCGCATCTTCCAATTTGGCAACACC 2086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618232693393760