Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq659 120 7e-22
seq11515 118 2e-21
seq856 118 2e-21
seq16268 114 3e-20
seq9317 114 3e-20
seq8967 114 3e-20
seq5419 114 3e-20
seq1038 114 3e-20
seq783 114 3e-20
seq22364 109 1e-18
seq5107 109 1e-18
seq13147 105 2e-17
seq8819 105 2e-17
seq4503 98.7 2e-15
seq10671 93.3 1e-13
seq18229 91.5 3e-13
seq16001 91.5 3e-13
seq12421 91.5 3e-13
seq91 91.5 3e-13
>seq659
Length=40447
Score = 120 bits (132), Expect = 7e-22
Identities = 179/265 (68%), Gaps = 43/265 (16%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 37735 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 37794
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT--------------------------- 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 37795 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGATCTAAACATTGAACTTGAGAATTAAACA 37854
Query 210986 -----------AAGGC-----GTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029
||| | |||| || |||||||| | |||||| |||||||| ||||
Sbjct 37855 AATGGAAAATAAAGACCAATCGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCT 37914
Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089
| || |||||||| ||||| ||||| ||| || || |||||||| ||||||||||
Sbjct 37915 TGGCCTTGACGTTTTCAATGGTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCG 37974
Query 211090 TGAGAGTCTTTACAAACACCTGCAT 211114
|||| ||||| ||||| | ||||||
Sbjct 37975 TGAGGGTCTTCACAAAGATCTGCAT 37999
Score = 113 bits (124), Expect = 1e-19
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || ||||| |||| ||||||||| || || ||||| || |||||||||||
Sbjct 38146 CGTTGCTGATCAGGCGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 38205
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| ||||| ||||||||||| |||||||| || |||||||| || || | |
Sbjct 38206 GTGTCAGAAGCCTCAACTTCGAGAGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAAATC 38265
Query 211110 TGCAT 211114
|||||
Sbjct 38266 TGCAT 38270
Score = 109 bits (120), Expect = 1e-18
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| |||||||||||||||
Sbjct 38417 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACGTTTTCGATG 38476
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 38477 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 38536
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 38537 TGCATATT 38544
>seq11515
Length=6677
Score = 118 bits (130), Expect = 2e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| ||||||||| || || ||||| || |||||||||||
Sbjct 5406 CGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 5347
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| |||||| ||||| ||||| |||||||| || |||||||| || || | |
Sbjct 5346 GTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACTAAAATC 5287
Query 211110 TGCAT 211114
|||||
Sbjct 5286 TGCAT 5282
Score = 118 bits (130), Expect = 2e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| |||||| |||||||| ||||| || ||||| || |||
Sbjct 5674 CGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATG 5615
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| ||| || || |||||||| |||||||||||||| ||||| ||||| | |
Sbjct 5614 GTATCAGACGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 5555
Query 211110 TGCAT 211114
|||||
Sbjct 5554 TGCAT 5550
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 4804 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 4745
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 4744 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 4685
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 4684 TGCATATT 4677
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 5950 AGGCGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5891
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 5890 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5831
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 5830 ATTTGCATT 5822
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 5816 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 5757
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 5756 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 5724
>seq856
Length=36659
Score = 118 bits (130), Expect = 2e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| ||||||||| || || ||||| || |||||||||||
Sbjct 5133 CGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATA 5074
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| |||||| ||||| ||||| |||||||| || |||||||| || || | |
Sbjct 5073 GTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAAATC 5014
Query 211110 TGCAT 211114
|||||
Sbjct 5013 TGCAT 5009
Score = 113 bits (124), Expect = 1e-19
Identities = 100/125 (80%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||| || |||||||||| |||||| |||||||| ||||| || ||||| || |||
Sbjct 5401 CGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATG 5342
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| ||| || || || ||||| |||||||||||||| ||||| ||||| | |
Sbjct 5341 GTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 5282
Query 211110 TGCAT 211114
|||||
Sbjct 5281 TGCAT 5277
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 4861 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 4802
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 4801 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 4742
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 4741 TGCATATT 4734
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 5677 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5618
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 5617 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5558
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 5557 ATTTGCATT 5549
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 5543 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 5484
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 5483 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGAT 5451
>seq16268
Length=4329
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 3202 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 3261
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 3262 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 3321
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 3322 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 3359
>seq9317
Length=8507
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 919 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 860
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 859 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 800
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 799 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 762
>seq8967
Length=8834
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 6543 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 6602
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 6603 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 6662
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 6663 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 6700
>seq5419
Length=14078
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 13719 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 13660
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 13659 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 13600
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 13599 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 13562
>seq1038
Length=34009
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 17461 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 17402
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 17401 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 17342
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 17341 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 17304
>seq783
Length=38083
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| |||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 21083 CCATCCTCCAACTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 21024
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || || ||||||||||| || || || || | |||
Sbjct 21023 TTCTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 20964
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 20963 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 20926
>seq22364
Length=2645
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| || || ||||||||||| || ||||| || || || || | || |||
Sbjct 2167 CCATCCTCCAATTGTTTCCCTGCGAAGATTAGACGTTGCTGCTCCGGGGGGATCCCCTCC 2108
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || |||||||||||||| || || || || | |||
Sbjct 2107 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 2048
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 2047 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 2010
>seq5107
Length=14694
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| |||| ||||| ||||||||||| || ||||| || || || || | || |||
Sbjct 12771 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 12712
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||||||||| || || || ||||||||||| || || || || | |||
Sbjct 12711 TTCTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACTGCTCCACATCCAAGGTG 12652
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || ||||| || |||||
Sbjct 12651 ATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 12614
>seq13147
Length=5676
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || |||||||||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 5227 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATG 5286
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| || || || ||||||||||| ||||| || |||||||| || || | |
Sbjct 5287 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATC 5346
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 5347 TGCATATT 5354
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || || ||||||| ||||||||| || || ||||| || |||||||||
Sbjct 4953 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5012
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| |||||||| |||||| ||||| ||||| ||||| || || | ||| || || ||
Sbjct 5013 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5072
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 5073 ATTTGCATT 5081
>seq8819
Length=8975
Score = 105 bits (116), Expect = 2e-17
Identities = 178/266 (67%), Gaps = 45/266 (17%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || ||||||||||| || || || |||||||||||||| ||||| ||
Sbjct 8536 ACGAAGACGCAAAACGAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCGGCAAGAGT 8595
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT--------------------------- 210985
| |||||| || ||||| ||||| ||||||||
Sbjct 8596 ACGTCCATCCTCAAGCTGTTTGCCAGCGAAGATCTAAATATTGAATACGAAAATTTTAAA 8655
Query 210986 ----------AAGG------CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029
||| ||||| || |||||||||| |||| | |||||||| ||||
Sbjct 8656 AAAGTGAAAAAAGAACCAATCGTTGCTGATCAGGAGGAATTCCT-CTTTGTCCTGAATCT 8714
Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG-AGTGATCGTCTTTCCC 211088
| || ||||| || ||||| ||||| ||| || || || |||||| |||||||||
Sbjct 8715 TGGCCTTGACGTTCTCAATGGTATCAGACGCTTCCACTTCTAGGAGTGATTGTCTTTCCC 8774
Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| | ||||||
Sbjct 8775 GTGAGGGTCTTCACAAAGATCTGCAT 8800
>seq4503
Length=16266
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || ||||| |||| || || |||||||| ||||| |||||| || ||
Sbjct 8076 AGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATCTTAGCTTTCACATTCTCA 8017
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
||||| || ||| ||| || || ||||| || ||||||||||| |||||||| |||||
Sbjct 8016 ATGGTATCCGAGGCTTCCACTTCAAGAGTAATAGTCTTTCCCGTAAGAGTCTTCACAAAA 7957
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 7956 ATTTGCATT 7948
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || ||||| || || | ||||||||||| || || || || || ||||| ||
Sbjct 7800 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATC 7741
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
||||||||| |||||| || |||||||| |||||||| || | |||||||| || | |
Sbjct 7740 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 7681
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 7680 TGCATATT 7673
>seq10671
Length=7258
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || || ||||| |||| || ||||||||||| ||||| |||||| || ||
Sbjct 3583 AGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTCTCA 3524
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|| || || ||| ||| || || ||||| || ||||||||||| || ||||| |||||
Sbjct 3523 ATAGTATCCGAGGCTTCCACTTCCAGAGTAATAGTCTTTCCCGTAAGTGTCTTAACAAAA 3464
Query 211107 ACCTGCATT 211115
| ||||||
Sbjct 3463 ATTTGCATT 3455
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || ||||| || || | ||||||||||| || || || || || ||||| ||
Sbjct 3303 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATT 3244
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
||||||||| |||||| || |||||||| |||||||| || | |||||||| || | |
Sbjct 3243 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 3184
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 3183 TGCATATT 3176
>seq18229
Length=3682
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 1768 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 1709
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 1708 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 1649
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 1648 TGCATATT 1641
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| || ||||| ||||||||||||||||| || | |||
Sbjct 1911 ACGAAGACGTAAAACTAAGTGAAGTGTAGACTCCTTTTGGATGTTATAATCAGCCAAGGT 1852
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
| ||||||||| || |||||||| || |||||
Sbjct 1851 TCGTCCATCTTCAAGTTGCTTGCCAGCAAAGAT 1819
>seq16001
Length=4432
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 2077 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 2018
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 2017 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 1958
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 1957 TGCATATT 1950
>seq12421
Length=6087
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 1094 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 1035
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 1034 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 975
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 974 TGCATATT 967
>seq91
Length=67459
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| ||||| ||||| || | || || || || || || ||| || || || || |||
Sbjct 15193 CGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATTCTCAATG 15134
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||||| |||||||||||||| || || ||||| ||||||||||||||||| | |
Sbjct 15133 GTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTACAAAAATC 15074
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 15073 TGCATATT 15066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158762946569540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |