Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1949 138 2e-27
seq13211 132 7e-26
seq8748 132 7e-26
seq6 131 2e-25
seq865 113 6e-20
seq545 113 6e-20
seq21 107 3e-18
seq554 104 3e-17
seq668 98.7 1e-15
seq4819 86.0 9e-12
seq2747 86.0 9e-12
>seq1949
Length=26475
Score = 138 bits (152), Expect = 2e-27
Identities = 295/446 (66%), Gaps = 45/446 (10%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||| | | ||||||
Sbjct 12058 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 11999
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 11998 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 11939
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || |||| | || || |
Sbjct 11938 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACC--A 11881
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 11880 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 11821
Query 48357 GGCATTGTTTCTATAGCATTAAA---------------GAGAAAGttttt---------- 48391
| |||||||||||| | ||| |||||
Sbjct 11820 TCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTTAATCTAAA 11761
Query 48392 -------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438
|||| | |||||||| |||||||| ||||| ||||||||
Sbjct 11760 GAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTT 11701
Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498
| || |||||||||||||| || || |||||||| |||||||| | ||||||| || |
Sbjct 11700 CTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTT 11641
Query 48499 GTACCTCCGTACAAAATCGTTCAGCC 48524
| || || | ||| |||||| ||
Sbjct 11640 GAACTTCTTGAGCAAAACGTTCAACC 11615
>seq13211
Length=5644
Score = 132 bits (146), Expect = 7e-26
Identities = 297/451 (66%), Gaps = 50/451 (11%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||||| | ||||||
Sbjct 4790 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 4731
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 4730 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 4671
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| ||||||||||||||| || || || || ||||| || | || | || || |
Sbjct 4670 AAAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACC--A 4613
Query 48302 ACTG--GCTTCGTT--GTGTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 4612 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 4553
Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA----------------AGttttt---- 48391
| | |||||||||||| | ||| | |||||
Sbjct 4552 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAAT 4493
Query 48392 ------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
|||| | |||||||| |||||||| ||||| |||
Sbjct 4492 CTAAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATA 4433
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||||| || |||||||||||||| || || |||||||| |||||||| | || ||||
Sbjct 4432 CATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGG 4373
Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCC 48524
|| || || || | ||| |||||| ||
Sbjct 4372 TATTTGAACTTCTTGAGCAAAACGTTCAACC 4342
>seq8748
Length=9037
Score = 132 bits (146), Expect = 7e-26
Identities = 294/446 (66%), Gaps = 45/446 (10%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||| | | ||||||
Sbjct 8680 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 8621
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 8620 TTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 8561
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || | || | || || |
Sbjct 8560 AAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACC--A 8503
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 8502 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 8443
Query 48357 GGCATTGTTTCTATAGCATTAAA--------------GAGAAAGttttt----------- 48391
| |||||||||||| | ||| |||||
Sbjct 8442 TCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTTTAATCTGAA 8383
Query 48392 -------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438
|||| | |||||||| |||||||| ||||| ||||||||
Sbjct 8382 GAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTT 8323
Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498
| || |||||||||||||| || || |||||||| |||||||| | ||||||| || |
Sbjct 8322 CTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTT 8263
Query 48499 GTACCTCCGTACAAAATCGTTCAGCC 48524
| || || | ||| |||||| ||
Sbjct 8262 GAACTTCTTGAGCAAAACGTTCAACC 8237
>seq6
Length=123133
Score = 131 bits (144), Expect = 2e-25
Identities = 295/445 (66%), Gaps = 45/445 (10%)
Strand=Plus/Plus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||||| || | |||||| |||||||| | |||||| |||||||| | | ||||||
Sbjct 115742 CAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAA 115801
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 115802 TTCATTACTTTGTGTCAGCCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 115861
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || | ||||| || | || | || || |
Sbjct 115862 AAAACTTCCAGAGAAGAATATACCCTCAACTGTGGCAAAAGCAATGAGACGTTCACC--A 115919
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||| ||||| || ||||| | | ||
Sbjct 115920 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCATTCAGCTTTTTTCTTGATAAAA 115979
Query 48357 GGCATTGTTTCTATAGCATTAAAGAG---------------AAAGttttt---------- 48391
| | |||||||||||| | ||| |||||
Sbjct 115980 TCAAATTCAAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTAATCTAAAAA 116039
Query 48392 -----------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440
|||| | |||||||| |||||||| ||||| |||||||||
Sbjct 116040 AGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCT 116099
Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500
|| |||||||||||||| || || |||||||| |||||||| | ||||||| || ||
Sbjct 116100 GAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGA 116159
Query 48501 ACCTC-CGTACAAAATCGTTCAGCC 48524
|| || | ||||| |||||| ||
Sbjct 116160 ACTTCTTGCGCAAAA-CGTTCAACC 116183
>seq865
Length=36480
Score = 113 bits (124), Expect = 6e-20
Identities = 189/273 (69%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || ||||| ||||| ||| | ||||||||||
Sbjct 30176 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 30235
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 30236 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 30295
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| ||||| ||| ||||||||||||| |||
Sbjct 30296 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 30355
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 30356 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 30415
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 30416 AGATATTAAACGATTCTTCATTTGGTCATCCCA 30448
Score = 98.7 bits (108), Expect = 1e-15
Identities = 194/287 (68%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 34578 TTATTTCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 34637
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| | |
Sbjct 34638 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 34697
Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332
||||| | || |||||||| ||| || || || ||| ||||| || | ||| ||
Sbjct 34698 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTCA 34757
Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392
| || || || || || | | ||| ||| | |||||| ||| | ||| ||
Sbjct 34758 AAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGGA 34817
Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
| || || || || ||||| || ||||| || || ||||||||
Sbjct 34818 CGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 34864
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 35270 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 35329
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 35330 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 35388
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || |||||||| || ||||| |||||
Sbjct 35389 ACGATCATAAATAATTACTGAATTGAGTTT 35418
>seq545
Length=42957
Score = 113 bits (124), Expect = 6e-20
Identities = 293/452 (65%), Gaps = 51/452 (11%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||| | || | || ||| |||||||| | |||||| |||||||||| | ||||||
Sbjct 28614 CAAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAA 28555
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||| ||| ||| || || ||||| || ||||| || |||||||| ||||| ||
Sbjct 28554 TTCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGC 28495
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
||| |||||| |||||||| || || || || ||||| || | || | || || |
Sbjct 28494 AAAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACC--A 28437
Query 48302 ACTG--GCTTCGTTGT--GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA 48356
| || ||||| || | | |||| || | ||||||||||| || ||||| | | ||
Sbjct 28436 AATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAA 28377
Query 48357 GGCATTGTTTCTATAGCATTAAAGA-----GAA---------------AGttttt----- 48391
| | |||||||||||| | ||| | |||||
Sbjct 28376 TCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAA 28317
Query 48392 -------------------ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432
|||| | |||||||| |||||||| ||||| ||
Sbjct 28316 TTTAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAAT 28257
Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492
||||||| || |||||||||||||| || || |||||||| |||||||| | || ||||
Sbjct 28256 ACATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTG 28197
Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCC 48524
|| || || || | ||| |||||| ||
Sbjct 28196 GTATTTGAACTTCTTGAGCAAAACGTTCAACC 28165
>seq21
Length=96658
Score = 107 bits (118), Expect = 3e-18
Identities = 188/273 (69%), Gaps = 3/273 (1%)
Strand=Plus/Minus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || ||||| ||||| ||| | ||||||||||
Sbjct 32395 TGTACGCAAATAATACATTCCTGTTTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 32336
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 32335 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 32276
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 32275 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 32216
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 32215 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 32156
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 32155 AGATATTAAACGATTCTTCATTTGGTCATCCCA 32123
Score = 84.2 bits (92), Expect = 3e-11
Identities = 194/289 (67%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| ||||||||||||
Sbjct 28139 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGTAACATTGGAATA 28080
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| | |
Sbjct 28079 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 28020
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
||||| | || |||||||| ||| || || |||||| ||| || || || | ||| |
Sbjct 28019 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAGCGATTAATTGTTT 27962
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| || | ||
Sbjct 27961 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAGGAAAGCTGTG 27902
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 27901 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 27853
>seq554
Length=42686
Score = 104 bits (114), Expect = 3e-17
Identities = 187/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 10043 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 10102
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 10103 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 10162
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 10163 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 10222
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 10223 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 10282
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 10283 AGATATTAAACGATTCTTCATTTGGTCATCCCA 10315
Score = 96.9 bits (106), Expect = 5e-15
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 15020 TTATTTCCTCCCTGATCAATATAGCGTGCCACAGAATTAAAAACTTGCAACATTGGAATA 15079
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| | |
Sbjct 15080 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGA 15139
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
|| || | || |||||||| ||| || || |||||| ||| ||||| || | ||| |
Sbjct 15140 ATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 15197
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| ||| | |||
Sbjct 15198 CAAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 15257
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 15258 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 15306
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 15709 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 15768
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 15769 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 15827
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || |||||||| || ||||| |||||
Sbjct 15828 ACGATCATAAATAATTACTGAATTGAGTTT 15857
>seq668
Length=40291
Score = 98.7 bits (108), Expect = 1e-15
Identities = 186/273 (68%), Gaps = 3/273 (1%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 24054 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 24113
Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 24114 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 24173
Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 24174 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 24233
Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAA---GGTTTGTATTTTGAATGGAACCACCATC 77047
|||| | | ||||||||| ||||| | ||||||| | ||||| |||||
Sbjct 24234 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 24293
Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCA 77080
||||| | |||||| || | |||| |||
Sbjct 24294 AGATATTAAACGATTCTTCATTTGGTCATCCCA 24326
Score = 96.9 bits (106), Expect = 5e-15
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
||||| ||||||||||| ||||| | || |||| ||||| |||||||||||||
Sbjct 28603 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGAATTAAAAACTTGCAACATTGGAATA 28662
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || |||||||||||||||| || || || || ||||| |
Sbjct 28663 ATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATGG 28722
Query 78273 ATGGATATCCCTATTCCTCCTGCC-ATCTT-AGATATTAGAGCGCAACGTTTCAATGTAT 78330
||||| | || |||||||| ||| || || |||||| ||| ||||| || | ||| |
Sbjct 28723 ATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATAT--AAGCACAACGATTTATTGTTT 28780
Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390
| | || || || || || | | ||| ||| | |||||| ||| | |||
Sbjct 28781 CAAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTG 28840
Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439
|| | || || || || ||||| || ||||| || || ||||||||
Sbjct 28841 GACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 28889
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551
|| ||||| || || |||||||||||||||||||| || || ||||| || |||
Sbjct 29103 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 29162
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 78610
||| ||| | ||| ||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct 29163 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 29221
Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTT 78640
| || ||||||||||| ||||| |||||
Sbjct 29222 ACGATCATAAATAATAACTGAATTGAGTTT 29251
>seq4819
Length=15377
Score = 86.0 bits (94), Expect = 9e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353
|||||||||||| || || | ||||| |||| |||||||||| |||||| ||||||||
Sbjct 3882 AATTCCCAATTCTTTAACTTCTGTTAAAGATTGCCAATCCATATTAGCAGAACCTAAATA 3941
Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCAC 43400
|| |||| ||| || ||||||| ||| |||| | || |||||
Sbjct 3942 AAAATGTTGATTGTCAACAATCCAAAGTTTGCTATGCAAAATTCCAC 3988
>seq2747
Length=22298
Score = 86.0 bits (94), Expect = 9e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353
|||||||||||| || || | ||||| |||| |||||||||| |||||| ||||||||
Sbjct 13417 AATTCCCAATTCTTTAACTTCTGTTAAAGATTGCCAATCCATATTAGCAGAACCTAAATA 13358
Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCAC 43400
|| |||| ||| || ||||||| ||| |||| | || |||||
Sbjct 13357 AAAATGTTGATTGTCAACAATCCAAAGTTTGCTATGCAAAATTCCAC 13311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694441330701440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |