Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1949 147 3e-30
seq8748 143 4e-29
seq6 141 1e-28
seq13211 138 2e-27
seq545 123 4e-23
seq865 122 1e-22
seq554 120 4e-22
seq668 116 5e-21
seq21 113 6e-20
>seq1949
Length=26475
Score = 147 bits (162), Expect = 3e-30
Identities = 296/444 (67%), Gaps = 45/444 (10%)
Strand=Plus/Minus
Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669
||||||||| || | |||||| |||||||| | |||||| |||||||| | | |||||
Sbjct 12059 TCAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTA 12000
Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729
|||| ||| ||| || |||||||| | || || || || |||||||| || || |
Sbjct 11999 ATTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAG 11940
Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
| ||| |||||| |||||||| || || || || || || || | ||| | || ||
Sbjct 11939 CAAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACC-- 11882
Query 46790 AACTG--GCATCATTATGAA---TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA 46844
|| || || || ||| | |||| | ||||||||||||| |||||||| | | |
Sbjct 11881 AAATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAA 11822
Query 46845 AGGCATTGTTTCTATAGCATTAAA---------------GAGAAAGtttttttCATC--- 46886
| | |||||||||||| | ||| ||||||| |||
Sbjct 11821 ATCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTTAATCTAA 11762
Query 46887 ----------AC----------TATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926
|| |||||||| ||| ||||| ||||| |||||||
Sbjct 11761 AGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATT 11702
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
||||||||||| ||||||||||| || |||||||| |||||||| | ||||| | ||
Sbjct 11701 TCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATT 11642
Query 46987 TGTACCTCTGTACAAAATCGTTCA 47010
|| || ||| | ||| ||||||
Sbjct 11641 TGAACTTCTTGAGCAAAACGTTCA 11618
>seq8748
Length=9037
Score = 143 bits (158), Expect = 4e-29
Identities = 295/444 (66%), Gaps = 45/444 (10%)
Strand=Plus/Minus
Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669
||||||||| || | |||||| |||||||| | |||||| |||||||| | | |||||
Sbjct 8681 TCAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTA 8622
Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729
|||| ||| ||| || |||||||| | || || || || |||||||| || || |
Sbjct 8621 ATTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAG 8562
Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
| ||| |||||| |||||||| || || || || || || || | || | || ||
Sbjct 8561 CAAAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACC-- 8504
Query 46790 AACTG--GCATCATTATGAA---TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA 46844
|| || || || ||| | |||| | ||||||||||||| |||||||| | | |
Sbjct 8503 AAATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAA 8444
Query 46845 AGGCATTGTTTCTATAGCATTAAA---------------GAGAAAGtttttttCATC--- 46886
| | |||||||||||| | ||| ||||||| |||
Sbjct 8443 ATCAAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTTTAATCTGA 8384
Query 46887 ----------AC----------TATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926
|| |||||||| ||| ||||| ||||| |||||||
Sbjct 8383 AGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATT 8324
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
||||||||||| ||||||||||| || |||||||| |||||||| | ||||| | ||
Sbjct 8323 TCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATT 8264
Query 46987 TGTACCTCTGTACAAAATCGTTCA 47010
|| || ||| | ||| ||||||
Sbjct 8263 TGAACTTCTTGAGCAAAACGTTCA 8240
>seq6
Length=123133
Score = 141 bits (156), Expect = 1e-28
Identities = 296/443 (67%), Gaps = 45/443 (10%)
Strand=Plus/Plus
Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669
||||||||| || | |||||| |||||||| | |||||| |||||||| | | |||||
Sbjct 115741 TCAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTA 115800
Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729
|||| ||| ||| ||||||||||| | || || || || |||||||| || || |
Sbjct 115801 ATTCATTACTTTGTGTCAGCCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAG 115860
Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
| ||| |||||| |||||||| || || || | || || || | || | || ||
Sbjct 115861 CAAAACTTCCAGAGAAGAATATACCCTCAACTGTGGCAAAAGCAATGAGACGTTCACC-- 115918
Query 46790 AACTG--GCATC---ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA 46844
|| || || || | || | |||| | ||||||| ||||| |||||||| | | |
Sbjct 115919 AAATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCATTCAGCTTTTTTCTTGATAAA 115978
Query 46845 AGGCATTGTTTCTATAGCATTAAAGA-------------GAAAGtttttttCATC----- 46886
| | | |||||||||||| | ||| |||||| |||
Sbjct 115979 ATCAAATTCAAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTAATCTAAAA 116038
Query 46887 --------AC----------TATCTTTAACATATGTATCTATTAAAAGACTATACATTTC 46928
|| |||||||| ||| ||||| ||||| |||||||||
Sbjct 116039 AAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTC 116098
Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTG 46988
||||||||| ||||||||||| || |||||||| |||||||| | ||||| | || ||
Sbjct 116099 TGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTG 116158
Query 46989 TACCTC-TGTACAAAATCGTTCA 47010
|| || || ||||| ||||||
Sbjct 116159 AACTTCTTGCGCAAAA-CGTTCA 116180
>seq13211
Length=5644
Score = 138 bits (152), Expect = 2e-27
Identities = 297/449 (66%), Gaps = 50/449 (11%)
Strand=Plus/Minus
Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669
||||||||| || | |||||| |||||||| | |||||| |||||||||| | |||||
Sbjct 4791 TCAAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTA 4732
Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729
|||| ||| ||| || |||||||| | || || || || |||||||| || || |
Sbjct 4731 ATTCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAG 4672
Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
| ||| ||||||||||||||| || || || || || || || | || | || ||
Sbjct 4671 CAAAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACC-- 4614
Query 46790 AACTG--GCATC---ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA 46844
|| || || || | || | |||| | ||||||||||||| |||||||| | | |
Sbjct 4613 AAATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAA 4554
Query 46845 AGGCATTGTTTCTATAGCATTAAAGA-----GAA---------------AGtttttttCA 46884
| | | |||||||||||| | ||| ||||||| |
Sbjct 4553 ATCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAA 4494
Query 46885 TC-------------AC----------TATCTTTAACATATGTATCTATTAAAAGACTAT 46921
|| || |||||||| ||| ||||| ||||| ||
Sbjct 4493 TCTAAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAAT 4434
Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981
|||||||||||||||| ||||||||||| || |||||||| |||||||| | || || |
Sbjct 4433 ACATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTG 4374
Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCA 47010
|| || || ||| | ||| ||||||
Sbjct 4373 GTATTTGAACTTCTTGAGCAAAACGTTCA 4345
>seq545
Length=42957
Score = 123 bits (136), Expect = 4e-23
Identities = 294/450 (65%), Gaps = 51/450 (11%)
Strand=Plus/Minus
Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669
||||||| | || | || ||| |||||||| | |||||| |||||||||| | |||||
Sbjct 28615 TCAAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTA 28556
Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729
|||| ||| ||| || |||||||| || || || || |||||||| || || |
Sbjct 28555 ATTCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAG 28496
Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789
| ||| |||||| |||||||| || || || || || || || | || | || ||
Sbjct 28495 CAAAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACC-- 28438
Query 46790 AACTG--GCATCATTATGAA---TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA 46844
|| || || || ||| | |||| | ||||||||||||| |||||||| | | |
Sbjct 28437 AAATGAAGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAA 28378
Query 46845 AGGCATTGTTTCTATAGCATTAAAGA-----GAA---------------AGtttttttCA 46884
| | | |||||||||||| | ||| | ||||||| |
Sbjct 28377 ATCAAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTA 28318
Query 46885 ---------------------TCACT---ATCTTTAACATATGTATCTATTAAAAGACTA 46920
||| | |||||||| ||| ||||| ||||| |
Sbjct 28317 ATTTAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAA 28258
Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980
||||||||||||||||| ||||||||||| || |||||||| |||||||| | || ||
Sbjct 28257 TACATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCT 28198
Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCA 47010
| || || || ||| | ||| ||||||
Sbjct 28197 GGTATTTGAACTTCTTGAGCAAAACGTTCA 28168
>seq865
Length=36480
Score = 122 bits (134), Expect = 1e-22
Identities = 214/311 (69%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427
|||| | ||| || ||||||| | | ||||| |||||| | ||| ||||| ||
Sbjct 30138 TTATTGACCGTAAATTGAATGGCATTGACAGCTGGCCGTGTACGCAAATAATACATTCCC 30197
Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487
||||| ||||| ||| | |||||||||| || | ||| | ||| | |||
Sbjct 30198 GTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGAGGTAATTTTTGCATATGTTGGA 30257
Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547
|| || ||||| | ||| | || |||||||| ||||| |||| ||| |||| | |||
Sbjct 30258 TCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGATAAAAGGAGCTCGATCAACTGCC 30317
Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607
||||| ||||| ||| ||||||||||||| ||||||| | | |||||||||
Sbjct 30318 ATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGTTTTGTATAAAGCTTTGATATCT 30377
Query 75608 TCTGGAA---GATTTGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664
||||| | | ||||||| | || || ||||||||||| | |||||| ||
Sbjct 30378 TCTGGCAATCCAACAATATTTTGGACAGAACCTCCATCAGATATTAAACGATTCTTCATT 30437
Query 75665 TCATCATTCCA 75675
| |||| |||
Sbjct 30438 TGGTCATCCCA 30448
Score = 116 bits (128), Expect = 5e-21
Identities = 200/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 76748 TTATTACCTCCCTGATCTATATATC-TGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806
||||| ||||||||||| ||||| | || || | |||| ||||| ||||||||||||
Sbjct 34578 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 34636
Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866
||| || || || | |||||||||||||| || || || | |||||||| |
Sbjct 34637 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 34696
Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926
||| || || || |||||||| ||| ||| || || |||||| || || | ||| ||
Sbjct 34697 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTC 34756
Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 34757 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 34816
Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034
| | || || || || || || || ||||| || ||||| |||||
Sbjct 34817 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 34864
Score = 84.2 bits (92), Expect = 3e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| ||||| ||||| |||||||||||||||||||| || | || || || |||
Sbjct 35270 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 35329
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 77205
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 35330 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 35388
Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTT 77235
| || |||||||| || ||||| |||||
Sbjct 35389 ACGATCATAAATAATTACTGAATTGAGTTT 35418
>seq554
Length=42686
Score = 120 bits (132), Expect = 4e-22
Identities = 201/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 76748 TTATTACCTCCCTGATCTATATATC-TGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806
||||| ||||||||||| ||||| | || || | |||| ||||| ||||||||||||
Sbjct 15020 TTATTTCCTCCCTGATCAATATAGCGTGCCACAG-AATTAAAAACTTGCAACATTGGAAT 15078
Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866
||| || || || | |||||||||||||| || || || | |||||||| |
Sbjct 15079 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 15138
Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926
||| || || || |||||||| ||| ||| ||||| |||||| || || | ||| ||
Sbjct 15139 AATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 15198
Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 15199 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 15258
Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034
| | || || || || || || || ||||| || ||||| |||||
Sbjct 15259 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 15306
Score = 113 bits (124), Expect = 6e-20
Identities = 212/311 (68%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427
|||| | ||| || ||||||| | | ||||| |||||| | ||| ||||| ||
Sbjct 10005 TTATTGACCGTAAATTGAATGGCATTGACAGCTGGCCGTGTACGCAAATAATACATCCCT 10064
Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487
|| || ||||| ||| | |||||||||| || | ||| | ||| | |||
Sbjct 10065 GTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGAGGTAATTTTTGCATATGTTGGA 10124
Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547
|| || ||||| | ||| | || |||||||| ||||| |||| ||| |||| | |||
Sbjct 10125 TCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGATAAAAGGAGCTCGATCAACTGCC 10184
Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607
||||| || || ||| ||||||||||||| ||||||| | | |||||||||
Sbjct 10185 ATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGTTTTGTATAAAGCTTTGATATCT 10244
Query 75608 TCTGGAA---GATTTGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664
||||| | | ||||||| | || || ||||||||||| | |||||| ||
Sbjct 10245 TCTGGCAATCCAACAATATTTTGGACAGAACCTCCATCAGATATTAAACGATTCTTCATT 10304
Query 75665 TCATCATTCCA 75675
| |||| |||
Sbjct 10305 TGGTCATCCCA 10315
Score = 84.2 bits (92), Expect = 3e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| ||||| ||||| |||||||||||||||||||| || | || || || |||
Sbjct 15709 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 15768
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 77205
||| ||| | ||| ||| ||| | |||||||| |||||||| | || || ||| ||
Sbjct 15769 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 15827
Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTT 77235
| || |||||||| || ||||| |||||
Sbjct 15828 ACGATCATAAATAATTACTGAATTGAGTTT 15857
>seq668
Length=40291
Score = 116 bits (128), Expect = 5e-21
Identities = 200/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 76748 TTATTACCTCCCTGATCTATATATC-TGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806
||||| ||||||||||| ||||| | || || | |||| ||||| ||||||||||||
Sbjct 28603 TTATTCCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 28661
Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866
||| || || || | |||||||||||||| || || || | |||||||| |
Sbjct 28662 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 28721
Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926
|| || || || |||||||| ||| ||| ||||| |||||| || || | ||| ||
Sbjct 28722 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 28781
Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 28782 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 28841
Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034
| | || || || || || || || ||||| || ||||| |||||
Sbjct 28842 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 28889
Score = 109 bits (120), Expect = 8e-19
Identities = 211/311 (68%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427
|||| | ||| || ||||||| | | ||||| |||||| | ||| ||||| ||
Sbjct 24016 TTATTGACCGTAAATTGAATGGCATTGACAGCTGGCCGTGTACGCAAATAATACATCCCC 24075
Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487
|| || ||||| ||| | |||||||||| || | ||| | ||| | |||
Sbjct 24076 GTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGAGGTAATTTTTGCATATGTTGGA 24135
Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547
|| || ||||| | ||| | || |||||||| ||||| |||| ||| ||| | |||
Sbjct 24136 TCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGATAAAAGGAGCTCGATCTACTGCC 24195
Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607
||||| || || ||| ||||||||||||| ||||||| | | |||||||||
Sbjct 24196 ATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGTTTTGTATAAAGCTTTGATATCT 24255
Query 75608 TCTGGAA---GATTTGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664
||||| | | ||||||| | || || ||||||||||| | |||||| ||
Sbjct 24256 TCTGGCAATCCAACAATATTTTGGACAGAACCTCCATCAGATATTAAACGATTCTTCATT 24315
Query 75665 TCATCATTCCA 75675
| |||| |||
Sbjct 24316 TGGTCATCCCA 24326
Score = 93.3 bits (102), Expect = 6e-14
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| ||||| ||||| |||||||||||||||||||| || | || || || |||
Sbjct 29103 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 29162
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTC 77205
||| ||| | ||| ||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct 29163 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 29221
Query 77206 TCTTTCGTAAATAATAACCGAATTTAGTTT 77235
| || ||||||||||| ||||| |||||
Sbjct 29222 ACGATCATAAATAATAACTGAATTGAGTTT 29251
>seq21
Length=96658
Score = 113 bits (124), Expect = 6e-20
Identities = 189/273 (69%), Gaps = 3/273 (1%)
Strand=Plus/Minus
Query 75406 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 75465
|||||| | ||| ||||| || ||||| ||||| ||| | ||||||||||
Sbjct 32395 TGTACGCAAATAATACATTCCTGTTTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 32336
Query 75466 TGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 75525
|| | ||| | ||| | ||||| || ||||| | ||| | || |||||||| |||||
Sbjct 32335 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 32276
Query 75526 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 75585
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 32275 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 32216
Query 75586 TTTGAAAACTTGTTTGATATCATCTGGAA---GATTTGTATTTTGAATGGATCCGCCATC 75642
|||| | | ||||||||| ||||| | | ||||||| | || || |||||
Sbjct 32215 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCATC 32156
Query 75643 AGATATAATTGTATTCTTGATCTCATCATTCCA 75675
|||||| | |||||| || | |||| |||
Sbjct 32155 AGATATTAAACGATTCTTCATTTGGTCATCCCA 32123
Score = 111 bits (122), Expect = 2e-19
Identities = 199/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 76748 TTATTACCTCCCTGATCTATATATC-TGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806
||||| ||||||||||| ||||| | || || | |||| ||||| |||||||||||
Sbjct 28139 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGA-ATTAAAAACTTGTAACATTGGAAT 28081
Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866
||| || || || | |||||||||||||| || || || | |||||||| |
Sbjct 28080 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 28021
Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926
||| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 28020 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAGCGATTAATTGTTTC 27961
Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986
| | || || || || ||| | | ||| ||| | |||||| || | || |
Sbjct 27960 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAGGAAAGCTGTGG 27901
Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034
| | || || || || || || || ||||| || ||||| |||||
Sbjct 27900 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 27853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712700949630720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |