Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq659 131 4e-25
seq856 127 4e-24
seq11515 123 5e-23
seq4503 118 2e-21
seq13147 114 3e-20
seq10671 114 3e-20
seq8172 113 9e-20
seq22364 109 1e-18
seq9317 109 1e-18
seq8967 109 1e-18
seq5419 109 1e-18
seq5107 109 1e-18
seq16268 104 5e-17
seq1038 104 5e-17
seq783 104 5e-17
>seq659
Length=40447
Score = 131 bits (144), Expect = 4e-25
Identities = 110/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 282965 AAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024
||| | ||| ||||| || ||| |||||| || ||||| ||||| ||||| || || ||
Sbjct 38136 AAAAACCAATCGTTGCTGATCAGGCGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGAC 38195
Query 283025 GGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084
| | ||||||||||| ||||| || |||||||||||||| ||||| || || | ||||||
Sbjct 38196 GTTTTCGATAGTGTCAGAAGCCTCAACTTCGAGAGTGATGGTCTTTCCAGTAAGAGTCTT 38255
Query 283085 AACGAATATCTGCAT 283099
|||||| ||||||||
Sbjct 38256 AACGAAAATCTGCAT 38270
Score = 113 bits (124), Expect = 9e-20
Identities = 104/132 (79%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| || || || ||| ||||| || ||||||||||| || ||||| || ||| | ||
Sbjct 38413 CAATCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACGTTTTC 38472
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| || || ||||| |||||||| ||||||||||| || || || | |||||| |||||
Sbjct 38473 GATGGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAA 38532
Query 283091 TATCTGCATTTT 283102
|||||||| ||
Sbjct 38533 GATCTGCATATT 38544
>seq856
Length=36659
Score = 127 bits (140), Expect = 4e-24
Identities = 111/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 282962 GGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021
|| ||| | ||| ||||| || ||| ||||| || ||||| ||||| ||||| || ||
Sbjct 5146 GGGAAAAACCAATCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTT 5087
Query 283022 TACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGT 283081
||| | ||||||||||| |||||||| |||||||| ||||| ||||| || || | |||
Sbjct 5086 GACGTTTTCGATAGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGT 5027
Query 283082 CTTAACGAATATCTGCAT 283099
||||||||| ||||||||
Sbjct 5026 CTTAACGAAAATCTGCAT 5009
Score = 114 bits (126), Expect = 3e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
||||| || ||||| ||||| ||||| || || ||| | ||||||||||| ||||||||
Sbjct 5659 GGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTGTCAGAAGCTTCA 5600
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||||| ||||| ||||| || |||||||| || ||||| || ||||||
Sbjct 5599 ACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAGATTTGCATT 5549
Score = 107 bits (118), Expect = 4e-18
Identities = 103/132 (78%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| || || || ||| ||||| || ||||||||||| || ||||| || || | ||
Sbjct 4865 CAATCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTC 4806
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| || || ||||| |||||||| ||||||||||| || || || | |||||| |||||
Sbjct 4805 GATGGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAA 4746
Query 283091 TATCTGCATTTT 283102
|||||||| ||
Sbjct 4745 GATCTGCATATT 4734
>seq11515
Length=6677
Score = 123 bits (136), Expect = 5e-23
Identities = 110/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 282962 GGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021
|| ||| | ||| ||||| || ||| ||||| || ||||| ||||| ||||| || ||
Sbjct 5419 GGGAAAAACCAATCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTT 5360
Query 283022 TACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGT 283081
||| | ||||||||||| |||||||| |||||||| ||||| ||||| || || | |||
Sbjct 5359 GACGTTTTCGATAGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGT 5300
Query 283082 CTTAACGAATATCTGCAT 283099
|||||| || ||||||||
Sbjct 5299 CTTAACTAAAATCTGCAT 5282
Score = 116 bits (128), Expect = 8e-21
Identities = 110/139 (79%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 282962 GGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021
|| ||| | ||| ||||| || ||| ||||| || ||||| ||||| ||||| || ||
Sbjct 5089 GGGAAAAACCAATCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTT 5030
Query 283022 TACGGTAT-CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAG 283080
||| | | |||||||||| |||||||| |||||||| ||||| ||||| || || | ||
Sbjct 5029 GACGTTTTTCGATAGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAG 4970
Query 283081 TCTTAACGAATATCTGCAT 283099
||||||| || ||||||||
Sbjct 4969 TCTTAACAAAAATCTGCAT 4951
Score = 114 bits (126), Expect = 3e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
||||| || ||||| ||||| ||||| || || ||| | ||||||||||| ||||||||
Sbjct 5932 GGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTGTCAGAAGCTTCA 5873
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||||| ||||| ||||| || |||||||| || ||||| || ||||||
Sbjct 5872 ACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAGATTTGCATT 5822
Score = 107 bits (118), Expect = 4e-18
Identities = 103/132 (78%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| || || || ||| ||||| || ||||||||||| || ||||| || || | ||
Sbjct 4808 CAATCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTC 4749
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| || || ||||| |||||||| ||||||||||| || || || | |||||| |||||
Sbjct 4748 GATGGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAA 4689
Query 283091 TATCTGCATTTT 283102
|||||||| ||
Sbjct 4688 GATCTGCATATT 4677
>seq4503
Length=16266
Score = 118 bits (130), Expect = 2e-21
Identities = 109/138 (79%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|||||| || ||||| ||| ||||| ||||||||||| || || || || || | ||
Sbjct 7804 CAAACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTC 7745
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || ||||| ||||| |||||||| ||||| || ||||| ||||| |||||
Sbjct 7744 AATCGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAA 7685
Query 283091 TATCTGCATTTTCATATA 283108
|||||||| |||| |||
Sbjct 7684 GATCTGCATATTCAAATA 7667
Score = 113 bits (124), Expect = 9e-20
Identities = 103/130 (79%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|| ||| || ||||| ||||| ||||| |||||||| || || ||||| ||| | ||
Sbjct 8343 CAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGACGTTTTC 8284
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || ||||| || || |||||||||||||| ||||| || ||||| |||||||||||
Sbjct 8283 AATCGTATCCGATGCCTCAACTTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAA 8224
Query 283091 TATCTGCATT 283100
|| ||||||
Sbjct 8223 AATTTGCATT 8214
Score = 100 bits (110), Expect = 6e-16
Identities = 100/130 (77%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|| ||| || || ||| ||||||||||| ||||| || ||||| ||||| || | ||
Sbjct 8077 CAGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATCTTAGCTTTCACATTCTC 8018
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || ||||| ||||| ||||| ||||| || ||||| ||||| | |||||| || ||
Sbjct 8017 AATGGTATCCGAGGCTTCCACTTCAAGAGTAATAGTCTTTCCCGTAAGAGTCTTCACAAA 7958
Query 283091 TATCTGCATT 283100
|| ||||||
Sbjct 7957 AATTTGCATT 7948
Score = 95.1 bits (104), Expect = 3e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| || || || || |||||| |||||||||||||| || || || || || | ||
Sbjct 8613 CAAGCGCTGCTGATCTGGCGGAATCCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTC 8554
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || || || ||||| |||||||| ||||| || || |||||||| || ||
Sbjct 8553 AATCGTGTCAGATGCCTCAACTTCAAGAGTGATAGTCTTTCCAGTTAAAGTCTTGACAAA 8494
Query 283091 TATCTGCATT 283100
|| ||||||
Sbjct 8493 GATTTGCATT 8484
>seq13147
Length=5676
Score = 114 bits (126), Expect = 3e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
||||| || ||||| ||||| ||||| || || ||| | ||||||||||| ||||||||
Sbjct 4971 GGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTGTCAGAAGCTTCA 5030
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||||| ||||| ||||| || |||||||| || ||||| || ||||||
Sbjct 5031 ACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAGATTTGCATT 5081
Score = 107 bits (118), Expect = 4e-18
Identities = 103/132 (78%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| || || || ||| ||||| || ||||||||||| || ||||| || || | ||
Sbjct 5223 CAATCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTC 5282
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| || || ||||| |||||||| ||||||||||| || || || | |||||| |||||
Sbjct 5283 GATGGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAA 5342
Query 283091 TATCTGCATTTT 283102
|||||||| ||
Sbjct 5343 GATCTGCATATT 5354
>seq10671
Length=7258
Score = 114 bits (126), Expect = 3e-20
Identities = 105/133 (79%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|||||| || ||||| ||| ||||| ||||||||||| || || || || || | ||
Sbjct 3307 CAAACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTC 3248
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || ||||| ||||| |||||||| ||||| || ||||| ||||| |||||
Sbjct 3247 AATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAA 3188
Query 283091 TATCTGCATTTTC 283103
|||||||| |||
Sbjct 3187 GATCTGCATATTC 3175
Score = 109 bits (120), Expect = 1e-18
Identities = 102/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|| ||| || || ||| ||||||||||||||||| || ||||| ||||| || | ||
Sbjct 3584 CAGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTCTC 3525
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||||| ||||| ||||| ||||| ||||| || ||||| ||||| | |||||||| ||
Sbjct 3524 AATAGTATCCGAGGCTTCCACTTCCAGAGTAATAGTCTTTCCCGTAAGTGTCTTAACAAA 3465
Query 283091 TATCTGCATT 283100
|| ||||||
Sbjct 3464 AATTTGCATT 3455
Score = 107 bits (118), Expect = 4e-18
Identities = 100/127 (79%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033
||| || ||||| |||||| ||||| |||||||| || || || || ||| | || ||
Sbjct 3848 ACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTTTCAAT 3789
Query 283034 AGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093
|| ||||| || || || ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct 3788 CGTATCCGATGCCTCAACCTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAAAAT 3729
Query 283094 CTGCATT 283100
||||||
Sbjct 3728 TTGCATT 3722
Score = 87.8 bits (96), Expect = 4e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
||||| |||||||||||||| || || || || || | || || ||||| || || ||
Sbjct 4101 GGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATCGTGTCAGATGCCTCA 4042
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||||| ||||| || ||||| || |||| ||| || || || |||||||||
Sbjct 4041 ACTTCAAGAGTTATAGTCTTTCCAGTCAGAGTTTTGACAAAGATCTGCATT 3991
>seq8172
Length=9710
Score = 113 bits (124), Expect = 9e-20
Identities = 103/130 (79%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
|| ||| || ||||| ||||| ||||| |||||||| || || ||||| ||| | ||
Sbjct 9424 CAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGACGTTTTC 9483
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || ||||| || || |||||||||||||| ||||| || ||||| |||||||||||
Sbjct 9484 AATCGTATCCGATGCCTCAACTTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAA 9543
Query 283091 TATCTGCATT 283100
|| ||||||
Sbjct 9544 AATTTGCATT 9553
Score = 102 bits (112), Expect = 2e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
||||| |||||||||||||| || || || || || | || || ||||| || || ||
Sbjct 9169 GGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATCGTGTCAGATGCCTCA 9228
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||||||||||| |||||||| |||||||| || || || || ||||||
Sbjct 9229 ACTTCGAGAGTGATAGTCTTACCAGTCAAAGTTTTGACAAAAATTTGCATT 9279
>seq22364
Length=2645
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || |||||||| || | ||| || |||||||| | ||||||||| || ||||| | |
Sbjct 2194 TGAATATTGTAGTCGGCCAACGTACGACCATCCTCCAATTGTTTCCCTGCGAAGATTAGA 2135
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 2134 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 2075
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 2074 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 2015
Query 283095 TGCAT 283099
|||||
Sbjct 2014 TGCAT 2010
>seq9317
Length=8507
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || ||||||||||| | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 946 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 887
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 886 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 827
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 826 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 767
Query 283095 TGCAT 283099
|||||
Sbjct 766 TGCAT 762
>seq8967
Length=8834
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || ||||||||||| | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 6516 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 6575
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 6576 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 6635
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 6636 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 6695
Query 283095 TGCAT 283099
|||||
Sbjct 6696 TGCAT 6700
>seq5419
Length=14078
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || ||||||||||| | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 13746 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 13687
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 13686 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 13627
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 13626 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 13567
Query 283095 TGCAT 283099
|||||
Sbjct 13566 TGCAT 13562
>seq5107
Length=14694
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || ||||||||||| | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 12798 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 12739
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 12738 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 12679
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 12678 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 12619
Query 283095 TGCAT 283099
|||||
Sbjct 12618 TGCAT 12614
>seq16268
Length=4329
Score = 104 bits (114), Expect = 5e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || |||||||| || | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 3175 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 3234
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 3235 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 3294
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 3295 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 3354
Query 283095 TGCAT 283099
|||||
Sbjct 3355 TGCAT 3359
>seq1038
Length=34009
Score = 104 bits (114), Expect = 5e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || |||||||| || | ||| || |||||||| | ||| ||||| || ||||| | |
Sbjct 17488 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 17429
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 17428 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 17369
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 17368 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 17309
Query 283095 TGCAT 283099
|||||
Sbjct 17308 TGCAT 17304
>seq783
Length=38083
Score = 104 bits (114), Expect = 5e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| || ||||||||||| | ||| || |||||||| | || ||||| || ||||| | |
Sbjct 21110 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAACTGCTTCCCTGCGAAGATGAGA 21051
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
||||| || || || || |||||||| || |||||||| || || || | |||||
Sbjct 21050 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 20991
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|||||||| || || || | ||||||||||| || || | || || || || |
Sbjct 20990 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 20931
Query 283095 TGCAT 283099
|||||
Sbjct 20930 TGCAT 20926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046387876380184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |