Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq856 122 2e-22
seq783 122 2e-22
seq659 122 2e-22
seq22364 120 7e-22
seq11515 118 3e-21
seq5107 118 3e-21
seq16268 113 1e-19
seq9317 113 1e-19
seq8967 113 1e-19
seq5419 113 1e-19
seq1038 113 1e-19
seq8819 111 4e-19
seq13147 104 6e-17
seq4503 100 7e-16
seq10671 84.2 5e-11
>seq856
Length=36659
Score = 122 bits (134), Expect = 2e-22
Identities = 173/255 (68%), Gaps = 45/255 (18%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| ||||| || |||||||| || |||||| || ||
Sbjct 5280 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACCCTAGAAGTGGAAGCGTCTGAT 5339
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||
Sbjct 5340 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 5399
Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058
||| ||| ||||||||
Sbjct 5400 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 5459
Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118
|| |||||||| || |||||| | |||||||||||||||||| |||| || ||||| ||
Sbjct 5460 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 5519
Query 178119 CTGCATCTTGTTTTG 178133
|| || || ||||||
Sbjct 5520 CTTCACCTCGTTTTG 5534
Score = 120 bits (132), Expect = 7e-22
Identities = 175/259 (68%), Gaps = 40/259 (15%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || ||||| || ||||| ||||| || ||| || |||
Sbjct 5012 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 5071
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || ||||||
Sbjct 5072 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 5131
Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063
||| | ||||| || || ||
Sbjct 5132 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 5191
Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || ||
Sbjct 5192 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 5251
Query 178124 TCTTGTTTTGAGACTCAGA 178142
|||||||||| |||| |||
Sbjct 5252 TCTTGTTTTGCGACTTAGA 5270
Score = 104 bits (114), Expect = 6e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || ||| || |||
Sbjct 5553 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5612
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 5613 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 5672
Query 178044 CGACT 178048
|| ||
Sbjct 5673 CGTCT 5677
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 4740 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 4799
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 4800 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 4859
Query 178044 CGA 178046
|||
Sbjct 4860 CGA 4862
>seq783
Length=38083
Score = 122 bits (134), Expect = 2e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 20929 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 20988
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 20989 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 21048
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || ||| | || |||||
Sbjct 21049 CGTCTCATCTTCGCAGGGAAGCAGTTGGAGGATGG 21083
>seq659
Length=40447
Score = 122 bits (134), Expect = 2e-22
Identities = 172/253 (68%), Gaps = 43/253 (17%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| ||||| || ||||| || || |||||| || ||
Sbjct 37996 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCTTCTGAT 37937
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 37936 ACCATTGAAAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATCCCTCCTGATCAGCAA 37877
Query 178044 CGA-----CTT--------------------------------------ATCTTCGCCGG 178060
||| ||| |||||||| ||
Sbjct 37876 CGATTGGTCTTTATTTTCCATTTGTTTAATTCTCAAGTTCAATGTTTAGATCTTCGCTGG 37817
Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120
|||||||| || |||||| | |||||||||||||||||| |||| || ||||| || ||
Sbjct 37816 CAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTCT 37757
Query 178121 GCATCTTGTTTTG 178133
|| || ||||||
Sbjct 37756 TCACCTCGTTTTG 37744
Score = 98.7 bits (108), Expect = 2e-15
Identities = 169/258 (66%), Gaps = 43/258 (17%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || ||||| || ||||| ||||| || || || |||
Sbjct 38267 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACTCTCGAAGTTGAGGCTTCTGAC 38208
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| || || || ||||||
Sbjct 38207 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCGCCTGATCAGCAA 38148
Query 178044 CGACTT-------------------------------------------ATCTTCGCCGG 178060
||| | ||||| || ||
Sbjct 38147 CGATTGGTTTTTATTTCCCATTTGTCTAATTTTCAAGCTAAATTTTTAGATCTTTGCTGG 38088
Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120
|||||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| ||
Sbjct 38087 TAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCT 38028
Query 178121 GCATCTTGTTTTGAGACT 178138
|||||||||||| ||||
Sbjct 38027 TCATCTTGTTTTGCGACT 38010
Score = 91.5 bits (100), Expect = 4e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 38538 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 38479
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 38478 ACCATCGAAAACGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 38419
Query 178044 CGA 178046
|||
Sbjct 38418 CGA 38416
>seq22364
Length=2645
Score = 120 bits (132), Expect = 7e-22
Identities = 132/176 (75%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 2013 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 2072
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 2073 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 2132
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
|| || |||||||| || ||||| | || ||||| | || | ||||| || ||
Sbjct 2133 CGTCTAATCTTCGCAGGGAAACAATTGGAGGATGGTCGTACGTTGGCCGACTACAA 2188
>seq11515
Length=6677
Score = 118 bits (130), Expect = 3e-21
Identities = 173/255 (68%), Gaps = 40/255 (16%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||||| || ||||| || ||||| ||||| || ||| || |||
Sbjct 5285 CAGATTTTAGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 5344
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || ||||||
Sbjct 5345 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 5404
Query 178044 CGA-------------------------------------CTT---ATCTTCGCCGGAAA 178063
||| ||| ||||| || || ||
Sbjct 5405 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATCTTTAGATCTTTGCTGGTAA 5464
Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || ||
Sbjct 5465 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 5524
Query 178124 TCTTGTTTTGAGACT 178138
|||||||||| ||||
Sbjct 5525 TCTTGTTTTGCGACT 5539
Score = 118 bits (130), Expect = 3e-21
Identities = 172/255 (67%), Gaps = 45/255 (18%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| ||||| || ||||| || || |||||| || ||
Sbjct 5553 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCGTCTGAT 5612
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||
Sbjct 5613 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 5672
Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058
||| ||| ||||||||
Sbjct 5673 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGTATTCAATATTTAGATCTTCGCT 5732
Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118
|| |||||||| || |||||| | |||||||||||||||||| |||| || ||||| ||
Sbjct 5733 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 5792
Query 178119 CTGCATCTTGTTTTG 178133
|| || || ||||||
Sbjct 5793 CTTCACCTCGTTTTG 5807
Score = 104 bits (114), Expect = 6e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || ||| || |||
Sbjct 5826 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5885
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 5886 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 5945
Query 178044 CGACT 178048
|| ||
Sbjct 5946 CGCCT 5950
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 4683 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 4742
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 4743 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 4802
Query 178044 CGA 178046
|||
Sbjct 4803 CGA 4805
>seq5107
Length=14694
Score = 118 bits (130), Expect = 3e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 12617 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 12676
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 12677 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 12736
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 12737 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 12771
>seq16268
Length=4329
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 3356 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 3297
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 3296 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 3237
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 3236 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 3202
>seq9317
Length=8507
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 765 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 824
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 825 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 884
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 885 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 919
>seq8967
Length=8834
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 6697 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 6638
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 6637 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 6578
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 6577 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 6543
>seq5419
Length=14078
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 13565 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 13624
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 13625 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 13684
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 13685 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 13719
>seq1038
Length=34009
Score = 113 bits (124), Expect = 1e-19
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | || || ||||| |||||||| || ||||||||| | || ||||| || |||
Sbjct 17307 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 17366
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| ||||| ||||||
Sbjct 17367 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 17426
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| || |||||||| || || || | || |||||
Sbjct 17427 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 17461
>seq8819
Length=8975
Score = 111 bits (122), Expect = 4e-19
Identities = 172/254 (68%), Gaps = 45/254 (18%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCAC-CCTCGAGGTGGAAAGCTCAGA 177982
|| || || ||||| || ||||| ||||| || ||||| ||| || |||||| || ||
Sbjct 8797 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCCTAGAAGTGGAAGCGTCTGA 8738
Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
||||| ||||||||||| |||||||||||||||| |||||| ||||| || |||||
Sbjct 8737 TACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAG-AGGAATTCCTCCTGATCAGCA 8679
Query 178043 ACGA------CTT-------------------------------------ATCTTCGCCG 178059
|||| ||| |||||||| |
Sbjct 8678 ACGATTGGTTCTTTTTTCACTTTTTTAAAATTTTCGTATTCAATATTTAGATCTTCGCTG 8619
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119
| |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || |
Sbjct 8618 GCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTC 8559
Query 178120 TGCATCTTGTTTTG 178133
| || || ||||||
Sbjct 8558 TTCACCTCGTTTTG 8545
Score = 91.5 bits (100), Expect = 4e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||| || || |||||||| || ||||| | |||||||| ||||| ||| |||| ||
Sbjct 8899 ATCTTTGCTGGTAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAG 8840
Query 178110 GAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||| || |||||||||||| |||| |||
Sbjct 8839 GAATCAACTCTTCATCTTGTTTTGCGACTTAGA 8807
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || || || |||
Sbjct 8526 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAGGCATCTGAC 8467
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| || ||||||||||| ||||| || || || || |||||
Sbjct 8466 ACTATAGAAAATGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCACCAGATCAGCAG 8407
Query 178044 CGACT 178048
|| ||
Sbjct 8406 CGTCT 8402
>seq13147
Length=5676
Score = 104 bits (114), Expect = 6e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||||||| | || || || || ||||||||||| || ||| || |||
Sbjct 5077 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5018
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||
Sbjct 5017 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 4958
Query 178044 CGACT 178048
|| ||
Sbjct 4957 CGTCT 4953
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || |||||||||||||| || || || || || ||
Sbjct 5348 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 5289
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 5288 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 5229
Query 178044 CGA 178046
|||
Sbjct 5228 CGA 5226
>seq4503
Length=16266
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| ||||| || ||||| || || || || || |||||| ||| ||
Sbjct 7952 CAAATTTTTGTGAAGACTCTTACGGGAAAGACTATTACTCTTGAAGTGGAAGCCTCGGAT 8011
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| || ||| ||||||||||||||||| || || || || || |||||
Sbjct 8012 ACCATTGAGAATGTGAAAGCTAAGATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 8071
Query 178044 CGACT 178048
|| ||
Sbjct 8072 CGTCT 8076
>seq10671
Length=7258
Score = 84.2 bits (92), Expect = 5e-11
Identities = 162/251 (65%), Gaps = 41/251 (16%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | ||||| || || ||||| |||||||| || || ||
Sbjct 3726 CAAATTTTCGTTAAGACGTTGACAGGCAAGACTATCACTCTCGAGGTTGAGGCATCGGAT 3785
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| || ||||| |||||||| || || || || ||||||||
Sbjct 3786 ACGATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAGGGGATTCCGCCAGACCAGCAG 3845
Query 178044 CGACTT-----------------------------------------ATCTTCGCCGGAA 178062
|| ||| |||||||| || |
Sbjct 3846 CGTCTTGTTTGTTTGCCCTGTCTAATTCTGACTTTTCATGTTTTTAGATCTTCGCTGGTA 3905
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
||||||||||||| || | || ||||| || || ||| | ||||| || || ||||| |
Sbjct 3906 AACAGCTCGAAGACGGTCGTACCCTTGCAGACTACAACATTCAAAAGGAGTCTACACTCC 3965
Query 178123 ATCTTGTTTTG 178133
|||||||||||
Sbjct 3966 ATCTTGTTTTG 3976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203327184174024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |