Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq856 122 2e-22 seq783 122 2e-22 seq659 122 2e-22 seq22364 120 7e-22 seq11515 118 3e-21 seq5107 118 3e-21 seq16268 113 1e-19 seq9317 113 1e-19 seq8967 113 1e-19 seq5419 113 1e-19 seq1038 113 1e-19 seq8819 111 4e-19 seq13147 104 6e-17 seq4503 100 7e-16 seq10671 84.2 5e-11 >seq856 Length=36659 Score = 122 bits (134), Expect = 2e-22 Identities = 173/255 (68%), Gaps = 45/255 (18%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| ||||| || |||||||| || |||||| || || Sbjct 5280 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACCCTAGAAGTGGAAGCGTCTGAT 5339 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct 5340 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 5399 Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058 ||| ||| |||||||| Sbjct 5400 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGAATTCAATATTTAGATCTTCGCT 5459 Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 || |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || Sbjct 5460 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 5519 Query 178119 CTGCATCTTGTTTTG 178133 || || || |||||| Sbjct 5520 CTTCACCTCGTTTTG 5534 Score = 120 bits (132), Expect = 7e-22 Identities = 175/259 (68%), Gaps = 40/259 (15%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct 5012 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 5071 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || |||||| Sbjct 5072 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 5131 Query 178044 CGACTT----------------------------------------ATCTTCGCCGGAAA 178063 ||| | ||||| || || || Sbjct 5132 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATTTTTAGATCTTTGCTGGTAA 5191 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || || Sbjct 5192 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 5251 Query 178124 TCTTGTTTTGAGACTCAGA 178142 |||||||||| |||| ||| Sbjct 5252 TCTTGTTTTGCGACTTAGA 5270 Score = 104 bits (114), Expect = 6e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || ||| || ||| Sbjct 5553 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5612 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 5613 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 5672 Query 178044 CGACT 178048 || || Sbjct 5673 CGTCT 5677 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 4740 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 4799 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 4800 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 4859 Query 178044 CGA 178046 ||| Sbjct 4860 CGA 4862 >seq783 Length=38083 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 20929 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 20988 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 20989 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 21048 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || ||| | || ||||| Sbjct 21049 CGTCTCATCTTCGCAGGGAAGCAGTTGGAGGATGG 21083 >seq659 Length=40447 Score = 122 bits (134), Expect = 2e-22 Identities = 172/253 (68%), Gaps = 43/253 (17%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| ||||| || ||||| || || |||||| || || Sbjct 37996 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCTTCTGAT 37937 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct 37936 ACCATTGAAAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATCCCTCCTGATCAGCAA 37877 Query 178044 CGA-----CTT--------------------------------------ATCTTCGCCGG 178060 ||| ||| |||||||| || Sbjct 37876 CGATTGGTCTTTATTTTCCATTTGTTTAATTCTCAAGTTCAATGTTTAGATCTTCGCTGG 37817 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || || Sbjct 37816 CAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTCT 37757 Query 178121 GCATCTTGTTTTG 178133 || || |||||| Sbjct 37756 TCACCTCGTTTTG 37744 Score = 98.7 bits (108), Expect = 2e-15 Identities = 169/258 (66%), Gaps = 43/258 (17%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || ||||| || ||||| ||||| || || || ||| Sbjct 38267 CAGATTTTCGTTAAGACTCTTACTGGAAAGACCATCACTCTCGAAGTTGAGGCTTCTGAC 38208 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| || || || |||||| Sbjct 38207 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCGCCTGATCAGCAA 38148 Query 178044 CGACTT-------------------------------------------ATCTTCGCCGG 178060 ||| | ||||| || || Sbjct 38147 CGATTGGTTTTTATTTCCCATTTGTCTAATTTTCAAGCTAAATTTTTAGATCTTTGCTGG 38088 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 |||||||| || ||||| | |||||||| ||||| ||| |||| || |||||||| || Sbjct 38087 TAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCT 38028 Query 178121 GCATCTTGTTTTGAGACT 178138 |||||||||||| |||| Sbjct 38027 TCATCTTGTTTTGCGACT 38010 Score = 91.5 bits (100), Expect = 4e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 38538 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 38479 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 38478 ACCATCGAAAACGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 38419 Query 178044 CGA 178046 ||| Sbjct 38418 CGA 38416 >seq22364 Length=2645 Score = 120 bits (132), Expect = 7e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 2013 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 2072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 2073 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 2132 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 || || |||||||| || ||||| | || ||||| | || | ||||| || || Sbjct 2133 CGTCTAATCTTCGCAGGGAAACAATTGGAGGATGGTCGTACGTTGGCCGACTACAA 2188 >seq11515 Length=6677 Score = 118 bits (130), Expect = 3e-21 Identities = 173/255 (68%), Gaps = 40/255 (16%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct 5285 CAGATTTTAGTTAAGACTCTTACTGGAAAGACCATCACACTCGAAGTTGAAGCTTCTGAC 5344 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || |||||| Sbjct 5345 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAA 5404 Query 178044 CGA-------------------------------------CTT---ATCTTCGCCGGAAA 178063 ||| ||| ||||| || || || Sbjct 5405 CGATTGGTTTTTCCCATTTGTTTAATTTTTCAAGCTAAATCTTTAGATCTTTGCTGGTAA 5464 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| || |||||| | |||||||| ||||| ||| |||| || |||||||| || || Sbjct 5465 ACAGCTTGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAATCAACTCTTCA 5524 Query 178124 TCTTGTTTTGAGACT 178138 |||||||||| |||| Sbjct 5525 TCTTGTTTTGCGACT 5539 Score = 118 bits (130), Expect = 3e-21 Identities = 172/255 (67%), Gaps = 45/255 (18%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| ||||| || ||||| || || |||||| || || Sbjct 5553 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCGTCTGAT 5612 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||| Sbjct 5613 ACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCAGCAA 5672 Query 178044 CGA------CTT---------------------------------------ATCTTCGCC 178058 ||| ||| |||||||| Sbjct 5673 CGATTGGTTCTTTTTTCACTTTTTTAAAAAATTTTCGTATTCAATATTTAGATCTTCGCT 5732 Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 || |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || Sbjct 5733 GGCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACT 5792 Query 178119 CTGCATCTTGTTTTG 178133 || || || |||||| Sbjct 5793 CTTCACCTCGTTTTG 5807 Score = 104 bits (114), Expect = 6e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || ||| || ||| Sbjct 5826 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5885 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 5886 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 5945 Query 178044 CGACT 178048 || || Sbjct 5946 CGCCT 5950 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 4683 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 4742 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 4743 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 4802 Query 178044 CGA 178046 ||| Sbjct 4803 CGA 4805 >seq5107 Length=14694 Score = 118 bits (130), Expect = 3e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 12617 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 12676 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 12677 ACCATCGAGAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 12736 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 12737 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 12771 >seq16268 Length=4329 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 3356 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 3297 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 3296 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 3237 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 3236 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 3202 >seq9317 Length=8507 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 765 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 824 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 825 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 884 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 885 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 919 >seq8967 Length=8834 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 6697 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 6638 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 6637 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 6578 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 6577 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 6543 >seq5419 Length=14078 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 13565 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 13624 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 13625 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 13684 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 13685 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 13719 >seq1038 Length=34009 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || ||||| |||||||| || ||||||||| | || ||||| || ||| Sbjct 17307 CAAGTCTTTGTCAAAACGCTCACAGGGAAGACGATCACCTTGGATGTGGAGCAGTCGGAC 17366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct 17367 ACCATCGAAAATGTCAAGGCCAAGATCCAGGAGAAGGAGGGGATCCCCCCGGAGCAGCAA 17426 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || |||||||| || || || | || ||||| Sbjct 17427 CGTCTCATCTTCGCAGGGAAGCAATTGGAGGATGG 17461 >seq8819 Length=8975 Score = 111 bits (122), Expect = 4e-19 Identities = 172/254 (68%), Gaps = 45/254 (18%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCAC-CCTCGAGGTGGAAAGCTCAGA 177982 || || || ||||| || ||||| ||||| || ||||| ||| || |||||| || || Sbjct 8797 CAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCCTAGAAGTGGAAGCGTCTGA 8738 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||| ||||||||||| |||||||||||||||| |||||| ||||| || ||||| Sbjct 8737 TACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAG-AGGAATTCCTCCTGATCAGCA 8679 Query 178043 ACGA------CTT-------------------------------------ATCTTCGCCG 178059 |||| ||| |||||||| | Sbjct 8678 ACGATTGGTTCTTTTTTCACTTTTTTAAAATTTTCGTATTCAATATTTAGATCTTCGCTG 8619 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119 | |||||||| || |||||| | |||||||||||||||||| |||| || ||||| || | Sbjct 8618 GCAAACAGCTTGAGGATGGACGTACTCTTGCCGATTATAACATCCAGAAGGAATCGACTC 8559 Query 178120 TGCATCTTGTTTTG 178133 | || || |||||| Sbjct 8558 TTCACCTCGTTTTG 8545 Score = 91.5 bits (100), Expect = 4e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| || || |||||||| || ||||| | |||||||| ||||| ||| |||| || Sbjct 8899 ATCTTTGCTGGTAAACAGCTTGAGGATGGGCGTACTCTTGCTGATTACAACATCCAGAAG 8840 Query 178110 GAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||| || |||||||||||| |||| ||| Sbjct 8839 GAATCAACTCTTCATCTTGTTTTGCGACTTAGA 8807 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || || || ||| Sbjct 8526 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAGGCATCTGAC 8467 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || ||||||||||| ||||| || || || || ||||| Sbjct 8466 ACTATAGAAAATGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCACCAGATCAGCAG 8407 Query 178044 CGACT 178048 || || Sbjct 8406 CGTCT 8402 >seq13147 Length=5676 Score = 104 bits (114), Expect = 6e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||||||| | || || || || ||||||||||| || ||| || ||| Sbjct 5077 CAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAAGCTTCTGAC 5018 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || |||||||| ||||| || ||||| Sbjct 5017 ACTATCGAAAACGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAG 4958 Query 178044 CGACT 178048 || || Sbjct 4957 CGTCT 4953 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || |||||||||||||| || || || || || || Sbjct 5348 CAGATCTTCGTCAAGACTCTTACTGGAAAAACGATCACTCTTGAAGTCGAGGCTTCTGAT 5289 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 5288 ACCATCGAAAATGTGAAGGCAAAAATTCAAGACAAGGAAGGCATTCCTCCTGATCAGCAG 5229 Query 178044 CGA 178046 ||| Sbjct 5228 CGA 5226 >seq4503 Length=16266 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| ||||| || ||||| || || || || || |||||| ||| || Sbjct 7952 CAAATTTTTGTGAAGACTCTTACGGGAAAGACTATTACTCTTGAAGTGGAAGCCTCGGAT 8011 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || ||| ||||||||||||||||| || || || || || ||||| Sbjct 8012 ACCATTGAGAATGTGAAAGCTAAGATTCAGGACAAAGAGGGTATTCCACCTGATCAGCAG 8071 Query 178044 CGACT 178048 || || Sbjct 8072 CGTCT 8076 >seq10671 Length=7258 Score = 84.2 bits (92), Expect = 5e-11 Identities = 162/251 (65%), Gaps = 41/251 (16%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | ||||| || || ||||| |||||||| || || || Sbjct 3726 CAAATTTTCGTTAAGACGTTGACAGGCAAGACTATCACTCTCGAGGTTGAGGCATCGGAT 3785 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| || ||||| |||||||| || || || || |||||||| Sbjct 3786 ACGATTGAAAACGTCAAGGCTAAAATTCAAGACAAAGAGGGGATTCCGCCAGACCAGCAG 3845 Query 178044 CGACTT-----------------------------------------ATCTTCGCCGGAA 178062 || ||| |||||||| || | Sbjct 3846 CGTCTTGTTTGTTTGCCCTGTCTAATTCTGACTTTTCATGTTTTTAGATCTTCGCTGGTA 3905 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 ||||||||||||| || | || ||||| || || ||| | ||||| || || ||||| | Sbjct 3906 AACAGCTCGAAGACGGTCGTACCCTTGCAGACTACAACATTCAAAAGGAGTCTACACTCC 3965 Query 178123 ATCTTGTTTTG 178133 ||||||||||| Sbjct 3966 ATCTTGTTTTG 3976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203327184174024