Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5344 89.7 1e-12 >seq5344 Length=4458 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||| |||||||||| |||| ||||||||| Sbjct 898 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 957 Query 165769 CCCC 165772 |||| Sbjct 958 CCCC 961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057028471394480