Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq8547 86.0 6e-12 >seq8547 Length=3126 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257 |||||| || || || | ||| |||||||| |||| || | ||| || || Sbjct 279 TAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTCATTACTTTGTGT 220 Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317 | || ||||| | || |||||||||| ||| || || |||||||| || || || Sbjct 219 CAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAAACTTCCAGAGAA 160 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 ||||||||||||||| | |||||||| || | ||||| | | | ||| |||||| | Sbjct 159 GAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAATGAAGCTTCTTTACT 100 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATC 16422 | | |||| | |||| || ||||||| || ||| |||| Sbjct 99 AGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511039175254720