Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq57627 104 2e-17 >seq57627 Length=208 Score = 104 bits (114), Expect = 2e-17 Identities = 89/109 (82%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 |||||||||||| || ||| |||||||||||||||||||||||| || || ||||| Sbjct 165 AATATAAGTATCAATTAATTTTGAATACATTTCTGAATGAATATTTTCAATAGCAATTTG 106 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAA 13527 || ||||||||||| | |||||||| || |||||||| ||| |||| Sbjct 105 AAATCCATAAAAACAACGAGCCTCTGGTATTTGAACTTCTTGAGCAAAA 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430674093507792