Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq13693 100 1e-16 >seq13693 Length=1959 Score = 100 bits (110), Expect = 1e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 30874 CACCCCATTGCTTGAACAGGAACGGCACAT-CTGCGGCAGCGCACTGGTCGCGCAGCGAC 30932 ||||||| |||||||| | ||| | |||| ||||| ||||||||||||| || | | | Sbjct 227 CACCCCACTGCTTGAAGAAGAAGGCGACATTCTGCG-CAGCGCACTGGTCACGAATCTCC 169 Query 30933 CGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGATCACC 30992 || ||||| ||| ||| || |||||||| | |||||||||||||| ||||||||| Sbjct 168 CGCGCCCATTCGATCGCCATGGGACGGGCGCCAGGTCCGCTTTCGCCGCCCGCGATCACC 109 Query 30993 CAATGTAGGCCG 31004 || || | |||| Sbjct 108 CAGTGGATGCCG 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175324111227504