Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3111 84.2 2e-11 >seq3111 Length=6167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || |||||||| || || | ||||| ||||||| ||| | || Sbjct 6167 AATGCAAATCTTCGTGAAAACTTTGACTGGGAAGACTATCACCCTCGAAGTTGAGGCATC 6108 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||||||| || |||| | || |||| ||| ||||| ||||| |||||||| | Sbjct 6107 TGACACTATAGAAAATGTCA---AGGCCAAAATTCA-GGACAAGGAAGGCATTCCACCAG 6052 Query 25114 ACCAACAGCG 25123 | || ||||| Sbjct 6051 ATCAGCAGCG 6042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433018015565240