Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq13757 84.2 3e-11 >seq13757 Length=1946 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 182871 TGCGAAATGGAGATTGGGTTCTCTTAAATCGTCAACCAACATTACATAAACCTTCTATGC 182930 ||||| |||| || || |||| |||||||||||||||||||| ||| || ||| Sbjct 1722 TGCGAGATGGCGACATTATTGTCTTTAATCGTCAACCAACATTACACAAAATGTCAATGA 1781 Query 182931 AAGCATTTATAGT---AGTTATTATTGATGGTAAAACTTTAAGGATGAATTTAGCCATGG 182987 | | || | | |||| || | |||| ||||| | |||||||| | | Sbjct 1782 TGGGACATAGAATTAAAGTTCTTCCT--TGGT-CTACTTTTCGTATGAATTTGTCTGTTA 1838 Query 182988 CTAAAGCTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGT 183047 | | | |||| ||||| |||||||||||||||||||||||||| ||| | || || |||| Sbjct 1839 CAACACCTTATAATGCTGATTTTGATGGAGATGAAATGAATTTGCATTTACCGCAATCGT 1898 Query 183048 ATGAAGCT 183055 ||| || Sbjct 1899 TGGAAACT 1906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657920129572160