Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq57627 100 3e-16 seq8871 91.5 2e-13 >seq57627 Length=208 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | |||||||||||||||| | ||||||||| || ||||||||||||||||| Sbjct 171 ATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAATGAATATTTTCAATAGC 112 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543 || ||||| ||||||||||| | ||| || | || |||||| || Sbjct 111 AATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTTGAACTTC 67 >seq8871 Length=3036 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 153292 TTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCTAATA 153351 |||| |||| ||| ||||||| ||||| ||| ||||| | ||| |||| |||||||| Sbjct 1451 TTTTGCATAGCAAACTTTGGATTGTTGACAATCAACATTTCTATTTAGGTTCTGCTAATA 1510 Query 153352 TGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTAT 153391 |||||||| |||| ||||| |||| |||||||| || || Sbjct 1511 TGGATTGGCAATCATTAACTGAAGTTAAAGAATTGGGAAT 1550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591882217163840