Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq6686 89.7 7e-13 >seq6686 Length=3811 Score = 89.7 bits (98), Expect = 7e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 116728 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116787 ||||||||||| ||||| || | || |||| ||| ||||| |||||||||| Sbjct 3391 TGGAATTGGAAAAAATAATTCTTTGCCGTGGAGATTACCTAAAGAATATAAACATTTTAT 3332 Query 116788 AAATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 116847 ||| | || || | ||| || || | ||||| ||||||||| | |||||| |||| Sbjct 3331 TAATTTAACAACAACAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGTAGAAA 3272 Query 116848 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 116901 | ||||| || ||||| | |||| | |||||||| ||||| ||||||| Sbjct 3271 ATGTTGGGAAAGCATTCCCGAAAAATATCGTCCATTAAAGAATCGTTTAAATAT 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632025542380480