Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq13757 104 6e-17 >seq13757 Length=1946 Score = 104 bits (114), Expect = 6e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 || ||| | |||||| || | || |||||||| ||||||| |||| | | ||||| | Sbjct 1745 TTTAATCGTCAACCAACATTACACAAAATGTCAATGATGGGACATAGAATTAAAGTTCTT 1804 Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455 || | | || ||||| | ||| | || | || ||||||||||| ||||||||| Sbjct 1805 CCTTGGTCTACTTTTCGTATGAATTTGTCTGTTACAACACCTTATAATGCTGATTTTGAT 1864 Query 305456 GGAGATGAAATGAATATGCATGTACCTCAATC 305487 ||||||||||||||| ||||| |||| ||||| Sbjct 1865 GGAGATGAAATGAATTTGCATTTACCGCAATC 1896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185920266334856