Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_026585.1 Length=60727 Score E Sequences producing significant alignments: (Bits) Value seq5531 140 1e-28 >seq5531 Length=4352 Score = 140 bits (154), Expect = 1e-28 Identities = 222/316 (70%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 43534 AATCGAGTGGACCGACGCCACATGGAATCCTGTCACCGGCTGCACCGAGGTCTCTCCGGG 43593 |||||| ||||| || || || ||||| || || || ||||| || || || | | || Sbjct 414 AATCGAATGGACGGATGCGACGTGGAACCCGGTAACGGGCTGTACGAAGATCACGGCCGG 355 Query 43594 GTGTGATCACTGCTACGCCAAGACG-TTCGCGGAACGCTGGCGCGGCACACCAGGCCACT 43652 || || ||||||| || | ||| || |||||||||||||||||| || |||||| Sbjct 354 TTGCGACAACTGCTATGCAGA-ACGCTTTTCGGAACGCTGGCGCGGCATCCCTGGCCACC 296 Query 43653 ACTTCGAGAACGGTTTTGATGTCCAGCTTCGTCCTGACAAGCTCGATCAGCCGTTGCGGT 43712 |||||| | ||||| ||| | || || ||||| |||| |||||| || | Sbjct 295 CGTTCGAGCATGGTTTCGATCTGACACTACGGCCTGAGCGCCTCGCCCAGCCGCTGGCAT 236 Query 43713 GGCGGAAGCCGCGAAAGATCTTCGTGAACAGCATGTCCGACCTGTTCCACGACCAGGTGC 43772 || | ||| || | ||||||||||||| |||||| |||||||||||| | |||||| Sbjct 235 GGAAGCGGCCCCGGATGATCTTCGTGAACTCCATGTCGGACCTGTTCCACAAGAAGGTGC 176 Query 43773 CCGACGAGTACATCGCGAAGGTGTTCGCGGTCATGGCGCTGGCCGAGCGCCACACCTTCC 43832 ||| | ||| | |||| |||| |||| || |||||| | || ||||| Sbjct 175 CCGGTACATTCATTGACCAGGTCTTCGACACGATGGAGCAGGCCGACTGGCATGTCTTCC 116 Query 43833 AGTTGCTCACCAAACG 43848 || |||| ||||| || Sbjct 115 AGGTGCTGACCAAGCG 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194069436341328