Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq312 131 5e-25 seq49882 127 6e-24 seq48301 125 2e-23 seq11904 125 2e-23 seq50049 122 3e-22 seq3537 120 9e-22 seq9496 111 5e-19 seq51208 107 6e-18 seq48304 107 6e-18 seq40541 105 2e-17 seq5613 104 7e-17 seq49867 102 2e-16 seq42683 102 2e-16 seq5570 102 2e-16 seq4398 100 9e-16 seq46755 98.7 3e-15 seq19682 98.7 3e-15 seq10346 98.7 3e-15 seq3111 98.7 3e-15 seq57673 96.9 1e-14 seq31089 96.9 1e-14 seq28723 96.9 1e-14 seq43004 93.3 1e-13 seq20662 93.3 1e-13 seq35495 89.7 2e-12 seq56005 87.8 5e-12 seq53960 87.8 5e-12 seq40071 87.8 5e-12 seq18389 87.8 5e-12 seq51405 86.0 2e-11 seq13757 86.0 2e-11 seq58050 84.2 7e-11 seq53396 84.2 7e-11 seq35022 84.2 7e-11 seq27895 84.2 7e-11 seq14119 84.2 7e-11 >seq312 Length=14379 Score = 131 bits (144), Expect = 5e-25 Identities = 174/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 130745 AAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGATTTACA 130804 || |||||||||||||||||| |||||||| ||||| || | ||| || ||| | |||| Sbjct 4705 AACCATAACAAAATCAGCTCCAGCTCCAAAAGCTTTGGCTACATCACCTGGACAGGTACA 4646 Query 130805 ACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCTGAAAT 130864 ||||||||| ||| | ||| || ||| ||||| || ||||| | || || ||| Sbjct 4645 CCCCCCATCACTAATTATATGCCCGCCTAAACCATGAGCGGCATCTGAGCATTCCAAAAC 4586 Query 130865 AGCAGAAAGTTGTGGATATCCAACTCCAG--TTACTTTTCTTGTAGTACAAACAGCACCT 130922 |||| || ||||||||| || || || | || | ||| || ||||||||| || Sbjct 4585 AGCACTAAATTGTGGATAGCCTACACCTGCCTTGC--TTCGAGTTGTACAAACACTCCCA 4528 Query 130923 GGACCAATACCAATTTTAACAATATCAGCTCCTGCTAAAATTAGTGCTTCGGTCATTTCT 130982 || ||||| || | ||| || | |||||| || | ||||||| | ||| ||||||| Sbjct 4527 GGGCCAATTCCTACTTTGACTAAATCAGCACCCGTCAAAATTAATTGTTCAACCATTTCT 4468 >seq49882 Length=286 Score = 127 bits (140), Expect = 6e-24 Identities = 103/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 ||||||||||||||||||||||||||||| |||||||| || || || || || ||||| Sbjct 188 CGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATG 129 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | ||| ||||| || || | ||||||||| || || || || ||||| ||| Sbjct 128 GTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 69 Query 140733 TGCAT 140737 ||||| Sbjct 68 TGCAT 64 >seq48301 Length=303 Score = 125 bits (138), Expect = 2e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||||||||| ||||| || || || |||||||| |||||||| ||||| ||| Sbjct 279 AGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTCTCA 220 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | ||| || | ||| ||||| || |||| |||||||| || ||||| || |||||| Sbjct 219 ATAGTATCCGAGGCTTCCACTTCCAGAGTAATAGTCTTTCCCGTAAGTGTCTTAACAAAA 160 Query 140730 ATCTGCATT 140738 || |||||| Sbjct 159 ATTTGCATT 151 >seq11904 Length=2278 Score = 125 bits (138), Expect = 2e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 130745 AAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGATTTACA 130804 || |||||||||||||||||| || ||||| ||||| || | ||| || ||| | |||| Sbjct 123 AACCATAACAAAATCAGCTCCAGCCCCAAAAGCTTTGGCTACATCACCTGGACAGGTACA 182 Query 130805 ACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCTGAAAT 130864 ||||||||| ||| | ||| || ||| ||||| || ||||| | || || ||| Sbjct 183 CCCCCCATCACTAATTATATGCCCGCCTAAACCATGAGCGGCATCTGAGCATTCCAAAAC 242 Query 130865 AGCAGAAAGTTGTGGATATCCAACTCCAG--TTACTTTTCTTGTAGTACAAACAGCACCT 130922 |||| || ||||||||| || || || | || | ||| || ||||||||| || Sbjct 243 AGCACTAAATTGTGGATAGCCTACACCTGCCTTGC--TTCGAGTTGTACAAACACTCCCA 300 Query 130923 GGACCAATACCAATTTTAACAATATCAGCTCCTGCTAAAATTAGTGCTTCGGTCATTTCT 130982 || ||||| || | ||| || | |||||| || | ||||||| | ||| ||||||| Sbjct 301 GGGCCAATTCCTACTTTGACTAAATCAGCACCCGTCAAAATTAATTGTTCAACCATTTCT 360 >seq50049 Length=284 Score = 122 bits (134), Expect = 3e-22 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 ||||||||||||||||| ||||||||||| |||||||| || || || || || ||||| Sbjct 97 CGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTTTCAATG 156 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | ||| ||||| || || | ||||||||| || || || || ||||| ||| Sbjct 157 GTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGATC 216 Query 140733 TGCAT 140737 ||||| Sbjct 217 TGCAT 221 >seq3537 Length=5734 Score = 120 bits (132), Expect = 9e-22 Identities = 182/273 (67%), Gaps = 46/273 (17%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || ||| | ||||| |||||||| ||||| || |||||||||| Sbjct 3109 CCACCACGAAGACGTAAAACTAAGTGAAGTGTAGACTCCTTTTGGATGTTATAATCAGCC 3168 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT--------------------- 140609 || ||||| |||||||||||||| || ||||||||||| Sbjct 3169 AAGGTTCGTCCATCTTCAAGTTGCTTACCAGCAAAGATCTTAAAAAGACTGATTTTTTGA 3228 Query 140610 -------------------------AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 | ||| || |||||||| || || || |||||||| Sbjct 3229 GAGAAAATTGGGAAATATACCAACCAAACGCTGTTGATCAGGCGGGATACCCTCTTTATC 3288 Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 |||||||| || || ||||| ||||| | |||||| | ||||| || || |||| || Sbjct 3289 TTGAATTTTTGCCTTAACATTCTCAATGGTATCAGAAGCCTCAACCTCGAGAGTAATAGT 3348 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || || ||||||||||||||||| Sbjct 3349 TTTTCCGGTGAGAGTCTTTACAAAAATCTGCAT 3381 >seq9496 Length=2859 Score = 111 bits (122), Expect = 5e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140612 ACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAAT 140671 ||| || ||||| || ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct 1505 ACGCTGTTGATCCGGCGGAATGCCCTCCTTATCTTGAATCTTGGCCTTAACATTTTCAAT 1446 Query 140672 CGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAAT 140731 || || |||| ||||||||||| |||| ||||||||||| | || || |||||||| Sbjct 1445 CGTGTCGGATGCCTCAACTTCAAGCGTAATAGTCTTTCCGGTCAAAGTCTTGACAAAAAT 1386 Query 140732 CTGCAT 140737 |||||| Sbjct 1385 CTGCAT 1380 >seq51208 Length=271 Score = 107 bits (118), Expect = 6e-18 Identities = 142/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 349563 AAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTG 349622 ||| |||| ||| || ||||| ||| | || | |||| |||||||| |||||| Sbjct 2 AAAGGAAGCAAACAGCCGAAGCTTATCTTGGCCATCCAGTTCGAGATGCTGTCGTTACTG 61 Query 349623 TACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG-CAGCATTGCG 349681 | ||||||||||||||||| | |||||| ||||| ||||| ||||| ||| ||||| Sbjct 62 TTCCAGCCTATTTTAATGACGGACAGCGTCAAGCAACTAAAGACGCTGGTCAG-ATTGCT 120 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| | |||| || |||||||| || ||||| || | || ||||| | Sbjct 121 GGACTTAATGTATTGCGAATTATAAATGAACCAACAGCTGCTGCTCTGGCTTATGGATTG 180 Query 349742 GAT---AAAATGAG 349752 ||| |||||||| Sbjct 181 GATAAGAAAATGAG 194 >seq48304 Length=303 Score = 107 bits (118), Expect = 6e-18 Identities = 199/291 (68%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || || || || ||||| || || || ||||| |||||||| | ||| Sbjct 2 ACTGTGCCTGCGTACTTCAATGACAGTCAACGCCAAGCCACAAAGGATGCTGGAACGATT 61 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 | || | | ||| | | || || || || || |||||||| || |||| ||||| Sbjct 62 TCTGGACTTATCGTTTTGCGTATCATCAACGAGCCAACTGCTGCGGCCATTGATTATGGT 121 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 | ||||| | | | | || | || || | |||||||| || | |||| ||| Sbjct 122 TTGGATAAGAAGGGCCAGGGCGAGCACAACGTTTTGATTTTTGACTTGTGCTGTGGAACT 181 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 ||||| ||||| | || || ||||||| ||||||||||| || || | ||||||| Sbjct 182 TTTGACGTATCTATTCTGACTATTGAAGATGGAATTTTTGATGTCAAGTCGACTGCTG-- 239 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || || |||| || ||||||||||| ||||| | |||| | |||| Sbjct 240 GAGACTCACTTTGGAGGCGAAGATTTTGACAATCGAATGGTTTGGAGTTTT 290 >seq40541 Length=419 Score = 105 bits (116), Expect = 2e-17 Identities = 185/265 (70%), Gaps = 7/265 (3%) Strand=Plus/Plus Query 349548 CAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTG 349607 ||||||| || ||||||||| |||| ||||| |||| ||| || |||| || | | Sbjct 150 CAATGGTCTTGACTAAAATGAATGAAACGGCTGAGGCATTTTTGGGAAAAACCGTTAAAG 209 Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| || ||||| ||||| || || || || || || || ||||| |||| Sbjct 210 ATGCTGT-ATCACTGTGCCAGCTTACTTCAACGACAGTCAACGCCAAGCCACAAAGGATG 268 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||| | || | | ||| | | || || || || || |||||||| || | Sbjct 269 CTGGAACGATTTCTGGACTTAGTGTCTTGCGTATCATCAACGACCCAACTGCTGCGGCTA 328 Query 349728 TTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT--TCTT-ATTTTTGATT 349784 |||| ||||| | ||||| || | ||||| | | | |||| |||||||| | Sbjct 329 TTGCTTATGGTTTGGATAA---GAAAGGCCAAGGCGAGCACAACGTCTTGATTTTTGACT 385 Query 349785 TAGGTGGTGGTACTTTTGATGTATC 349809 | || ||||| ||||||||||| || Sbjct 386 TGGGCGGTGGAACTTTTGATGTGTC 410 >seq5613 Length=4304 Score = 104 bits (114), Expect = 7e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228 || || ||||| |||||| ||| ||||| | ||| | |||||||| | ||||| Sbjct 1292 TTCCTAACAGTTCCATCATAGTTAATCATTACACTTTCCATAGCTTTAATCAAACGTCGT 1233 Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288 ||| ||||| |||| | |||||| || || |||||||| || || |||| |||||| Sbjct 1232 TGAATGTAACCGGTTTCAGCAGTTTTGACAGCTGTATCAATCAATCCTTCACGTCCACCC 1173 Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348 ||||| || || || ||||||| || || || ||| | | ||||| |||||| ||| Sbjct 1172 ATTGCGTGAAAAAAGAATTCAGATGGCGTGAGACCAGCCAAGTATGAATTCTCAACAAAA 1113 Query 378349 CC 378350 || Sbjct 1112 CC 1111 >seq49867 Length=286 Score = 102 bits (112), Expect = 2e-16 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 206487 CATAGGAATAATACCATTAGAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCT 206546 ||| |||||||| ||||| ||| ||||||||||||| || | || | | | Sbjct 18 CATTGGAATAATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACG 77 Query 206547 AATATTATGTATATGTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTT 206606 ||| ||| || | |||||||||||| ||| |||||||||||| |||||| || Sbjct 78 AATTGAATGAATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATT 137 Query 206607 TAATGTATTATAAATTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACT 206666 | ||| | | ||||||| |||| ||| | |||| | || |||||||||||| Sbjct 138 AATTGTTTCAAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGA 197 Query 206667 TAATTGTGGTCGTGGCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAA 206720 | |||||| ||| || || || || |||||||| |||| || || ||||| Sbjct 198 AAGTTGTGGACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAA 251 >seq42683 Length=382 Score = 102 bits (112), Expect = 2e-16 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || ||||| || ||||| || |||||||| ||||| || || ||| Sbjct 297 AGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCA 238 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| ||| |||| ||||||||||| || | ||||| || || | || || || ||| Sbjct 237 ATCGTATCCGATGCCTCAACTTCAAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAAA 178 Query 140730 ATCTGCATT 140738 || |||||| Sbjct 177 ATTTGCATT 169 Score = 96.9 bits (106), Expect = 1e-14 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | |||||||||||||| |||||||| |||||||| || | Sbjct 176 TTTGCATTCCACCGCGGAGACGCAGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGT 117 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 | || | | ||||| |||||||||||||| ||||||||||| || Sbjct 116 AGTCTGCAAGAGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAAAT 71 >seq5570 Length=4331 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140612 ACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAAT 140671 ||| ||||| || || || || ||||| || || |||||||| || || ||||| ||||| Sbjct 4277 ACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAAT 4218 Query 140672 CGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAAT 140731 | ||||| | |||||||||||| || | |||||||| || | |||||||| || || Sbjct 4217 TGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTTTTTACGAAGAT 4158 Query 140732 CTGCAT 140737 |||||| Sbjct 4157 CTGCAT 4152 >seq4398 Length=5060 Score = 100 bits (110), Expect = 9e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||||||||||||||| ||||| || || |||||||| || || || || || || Sbjct 4739 CGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACGTTTTCGATG 4680 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | || |||||||| || | || ||||| || || || ||||| || ||| Sbjct 4679 GTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTTACGAAGATC 4620 Query 140733 TGCAT 140737 ||||| Sbjct 4619 TGCAT 4615 >seq46755 Length=322 Score = 98.7 bits (108), Expect = 3e-15 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||||| || ||| ||| ||| ||| |||| | ||||| ||||| || || || || Sbjct 321 GATGCTAAGATGGACAAGTCTCAAATTCATGACATTGTTTTGGTTGGAGGCTCGACTCGA 262 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 ||||| ||||| || || | || || || ||| || |||||| ||| | ||| Sbjct 261 ATTCCTAAAGTCCAGGAGCTTCTGTCAGACTTTCTT--TGGCAAGGAAATTAACAGAAGC 204 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || || |||||||| || ||||| |||||||||||||| | ||||| ||||| Sbjct 203 ATCAACCCGGACGAAGCTGTCGCCTATGGAGCTGCTGTTCAGGCTGCGATTTTGTCTGGC 144 Query 350333 AATAAG 350338 ||||| Sbjct 143 GATAAG 138 >seq19682 Length=1261 Score = 98.7 bits (108), Expect = 3e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 130745 AAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGATTTACA 130804 || |||||||||||||||||| |||||||| ||||| || | ||| || || | |||| Sbjct 1108 AACCATAACAAAATCAGCTCCAGCTCCAAAAGCTTTGGCTACATCACCTGGGCAGGTACA 1167 Query 130805 ACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCTGAAAT 130864 ||||||||| ||| | ||| || ||| ||||| || ||||| | || || ||| Sbjct 1168 CCCCCCATCACTAATTATATGCCCGCCTAAACCATGGGCAGCATCTGAGCATTCCAAAAC 1227 Query 130865 AGCAGAAAGTTGTGGATATCCAACTCC 130891 |||| || ||||||||| || || || Sbjct 1228 AGCACTAAATTGTGGATAGCCTACACC 1254 >seq10346 Length=2631 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 14/210 (7%) Strand=Plus/Plus Query 349535 GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAA---ATTGCTGAAGCATATTTA 349591 ||||| |||||| |||||||| | | ||| | |||||| ||| ||| || | Sbjct 942 GAAGAGATTTCAGCAATGGTTCTTGGAAAAGTTAAGGAAGAAATT----AAGGATG---A 994 Query 349592 GGTGAAACA----GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCA 349647 || ||||| || || ||||||| ||||||| || | || ||||| ||||| || Sbjct 995 AGTTAAACATGAAGTTACGCATGCTGTGGTTACTGTCCCGACTTACTTTAACGATGCTCA 1054 Query 349648 GCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAA 349707 ||| || || ||||||||||| | ||| | || | |||||| || | || ||||| Sbjct 1055 ACGTCAAGCTACCAAAGATGCTGGAACCATCTCTGGACTTAATGTTGTACGTATTATTAA 1114 Query 349708 TGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||||| || ||||| ||||| || ||||| Sbjct 1115 TGAACCGACAGCTGCGGCAATAGCTTATGG 1144 >seq3111 Length=6167 Score = 98.7 bits (108), Expect = 3e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| |||||||| || ||||| ||||| || ||||||||||| || || ||||| || Sbjct 6039 AGACGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTTTCT 6098 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | ||||||| |||||||| || || | ||||| || || | ||||| || || Sbjct 6099 ATAGTGTCAGATGCCTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 6158 Query 140730 ATCTGCATT 140738 || |||||| Sbjct 6159 ATTTGCATT 6167 >seq57673 Length=208 Score = 96.9 bits (106), Expect = 1e-14 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||||| || ||| ||| ||| ||| | || | ||||| ||||| || || || ||| Sbjct 26 GATGCTAAGATGGACAAGTCTCAAATTCACGACATTGTTTTGGTTGGAGGCTCGACTCGT 85 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT-CTAGATC 350271 ||||| ||||| || | | || ||||| || ||| |||||| || | | | ||| | Sbjct 86 ATTCCTAAAGTCCAGAAACTTCTGTCTGACTTCTTTTCTGGCAAGGAGCTTAACAAGAGC 145 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 | | || || || |||||||| || ||||| |||||||||||||| | ||||| ||||| Sbjct 146 A-TCAACCCTGACGAAGCTGTCGCCTATGGAGCTGCTGTTCAGGCTGCAATTTTGTCTGG 204 >seq31089 Length=654 Score = 96.9 bits (106), Expect = 1e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||| |||||||| || || |||| |||||||||| || | | || ||||||| | Sbjct 167 TTCTGATTTTTGACTTGGGCTGTGGAACTTTTGATGCGTCTATTTTGACTATTGAAGATG 108 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | |||||||| ||||| | |||||||| || |||||||||| || |||| || ||| | Sbjct 107 GTATTTTTGAGGTTAAGTCGACTGCTGGAGA--CACATCTTGGAGGCGAAGGTTGTGACA 50 Query 349890 ATCGTCTCGTTTCGCATTTT 349909 |||| | |||| | ||||| Sbjct 49 ATCGAATGGTTTGGAATTTT 30 >seq28723 Length=739 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 54825 ATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGT 54884 |||||||||||||||||| || || | || | || |||||||| || | ||| | | Sbjct 573 ATTGGCAAGCAACAATTACTGGGCCTCCAAATTCTCCTTATCAAGGAGGAGTGTTTTACT 514 Query 54885 TAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACAA 54944 ||| |||| | ||||||||||| ||||| |||||||| ||||| | ||||| ||| Sbjct 513 TAAAAATTAACTTTCCACAAGAATATCCGTTTAAACCGCCAAAGATTAGTTTTAAAACAC 454 Query 54945 AGATTTATCAT 54955 ||||||| ||| Sbjct 453 AGATTTACCAT 443 >seq43004 Length=377 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | ||||||||||| || |||||||| || ||||| |||| Sbjct 176 TTTGCATTCCACCGCGAAGACGAAGAACAAGATGGAGTGTAGACTCCTTCTGAATGTTAT 117 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 |||| | | ||||| ||||||||||| || ||||||||||| || Sbjct 116 AATCCGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAAT 71 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || ||||| || ||||| || ||||||||||| || || || ||| Sbjct 297 AGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTTTCA 238 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| ||| |||| ||||| || || || | ||||| || || | || || || ||| Sbjct 237 ATCGTATCCGATGCCTCAACCTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAAA 178 Query 140730 ATCTGCATT 140738 || |||||| Sbjct 177 ATTTGCATT 169 >seq20662 Length=1182 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 || |||||||| | | ||||| | |||||| |||||||| ||||| |||||||||||| Sbjct 492 ATTCCACCACGAAGACGGAGAACTAAATGAAGTGTAGACTCCTTTTGGATATTATAATCA 433 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 | || || || ||||| || | |||||| ||||||||||| Sbjct 432 GCCAAAGTGCGTCCATCCTCCAATTGTTTACCAGCAAAGAT 392 >seq35495 Length=529 Score = 89.7 bits (98), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 350297 TATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGAT 350356 ||||| |||||||| || ||| ||||||| ||||| | | | | || | | ||| Sbjct 2 TATGGGGCTGCTGTACAAGCAGCTATTTTGTCTGGGGTTCGGGATGAGACAACTAAGGAT 61 Query 350357 CTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATG 350416 | | ||| | ||||| ||||||||||| | || ||||||| |||| | ||| ||| Sbjct 62 GTTCTTCTAGTTGATGTTACTCCACTTTCTTTGGGTATAGAAACGGCTGGGGGAGTGATG 121 Query 350417 ACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACA 350476 || ||| || | || ||| | || |||| |||||||| ||| |||| Sbjct 122 ACCAAACTTGTTGAACGCAACGCTACAATTCCCCACAAAACTTCCCAAACATTTACTACT 181 Query 350477 TTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACT 350536 | | | ||||||||||| || || || |||||||| | ||| || || | ||| ||| Sbjct 182 TATTCGGATAATCAGCCGGCTGTTACTATTCAAGTTTATGAGGGAGAGAGAGCTTTGACT 241 Query 350537 AAAGATAATAATAA 350550 || | ||||| || Sbjct 242 AAGGTGAATAAAAA 255 >seq56005 Length=222 Score = 87.8 bits (96), Expect = 5e-12 Identities = 97/129 (75%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 |||||||| ||||| || | || ||||||||||| ||||| || | | | ||| Sbjct 32 AATATTCTCATTTTCGACCTTGGCGGTGGTACTTTCGATGTTTCCGTGTTGTCTATTGCT 91 Query 349826 GAGGGAA---TTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGAT 349882 ||||| | |||||||||||| |||| ||||| ||||||||| | || || || ||| Sbjct 92 GAGGGTTCCTTGTTTGAAGTTAAATCAACCGCTGGCGATACACATTTGGGAGGGGAGGAT 151 Query 349883 TTTGATAAT 349891 ||||||||| Sbjct 152 TTTGATAAT 160 >seq53960 Length=243 Score = 87.8 bits (96), Expect = 5e-12 Identities = 168/245 (69%), Gaps = 7/245 (3%) Strand=Plus/Minus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || || || || ||||| || || || ||||| |||||||| | ||| Sbjct 242 ACTGTGCCTGCGTACTTCAATGACAGTCAACGCCAAGCCACAAAGGATGCTGGGACGATT 183 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 | || | |||||| | | || || || || || |||||||| || |||| ||||| Sbjct 182 TCTGGACTTAATGTTTTGCGTATCATCAACGAGCCAACTGCTGC-GCCATTGACTATGGT 124 Query 349739 CTTGATAAAATGAGTGACCAA---GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | ||||| || | |||| || || | | |||||||| || || ||||| Sbjct 123 TTGGATAA---GAAAGGCCAATGCGAGCGCAACGTCTTGATTTTTGACTTGGGCGGTGGA 67 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||||||||| || | | || ||||||| || |||||||| || || |||||||| Sbjct 66 ACTTTTGATGTTTCTATTTTGACTATTGAAGATGGTATTTTTGAGGTCAAGTCAACTGCT 7 Query 349856 GGTGA 349860 || || Sbjct 6 GGAGA 2 >seq40071 Length=427 Score = 87.8 bits (96), Expect = 5e-12 Identities = 97/129 (75%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 |||||||| ||||| || | |||||||||||||| || || || | | | ||| Sbjct 32 AATATTCTCATTTTCGACCTTGGTGGTGGTACTTTCGACGTTTCCGTGTTGTCTATTGCT 91 Query 349826 GAGGGAA---TTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGAT 349882 ||||| | || ||||||||| |||||||||| ||||||||| | || || || ||| Sbjct 92 GAGGGTTCCTTGTTCGAAGTTAAATCAACTGCTGGCGATACACATTTGGGAGGGGAGGAT 151 Query 349883 TTTGATAAT 349891 ||||||||| Sbjct 152 TTTGATAAT 160 >seq18389 Length=1378 Score = 87.8 bits (96), Expect = 5e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 ||| | ||| | ||||| |||||||| || ||||| ||||||||| ||||||| ||| || Sbjct 671 ATTCACGAAATTGTTTTGGTTGGTGGATCAACACGAATTCCAAAAATTCAACAATTATTA 730 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAG 350282 || || || ||||| |||||||||||| | |||||||||| Sbjct 731 AAAGATTTCTTCAATGGAAAAGAACCTTCTCGTGGTATTAATCCAG 776 >seq51405 Length=269 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || ||||||||||| || | | || ||||||| || |||||||| || || | ||| Sbjct 1 GGAACTTTTGATGTGTCTATTTTGACTATTGAAGATGGTATTTTTGAGGTCAAGCCGACT 60 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| || || ||||||| || ||||||||||| ||||| | |||| | ||||| Sbjct 61 GCTGGAGACACTAATCTTGGAGGCGAAGATTTTGACAATCGAATGGTTTGGAATTTT 117 >seq13757 Length=1946 Score = 86.0 bits (94), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 379257 TTGAGGCATATGAAGATTCATTTCATCACCATCAAAATCAGCATTATATGGCTTAGTATC 379316 ||| || | ||| | |||||||||||| |||||||||||||||||||| || | ||| | Sbjct 1894 TTGCGGTAAATGCAAATTCATTTCATCTCCATCAAAATCAGCATTATAAGGTGTTGTAAC 1835 Query 379317 TCCTACATTCATTCTAAAAGTATCACCTTGATATAAAATTTTAACAATATGACACATCAT 379376 | |||||| | ||||||| ||| | | || ||||| |||| | |||||| Sbjct 1834 AGACAAATTCATACGAAAAGTA-GACC--AAGGAAGAACTTTAATTCTATGTCCCATCAT 1778 Query 379377 TGATAATCTATGAAGTGTAGGCTGACGATTAAA 379409 ||| | | | || | ||| || ||||||||||| Sbjct 1777 TGACATTTTGTGTAATGTTGGTTGACGATTAAA 1745 >seq58050 Length=204 Score = 84.2 bits (92), Expect = 7e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 349821 TTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 ||||||| || |||||||| || || |||||||||| || || || ||||| || |||| Sbjct 9 TTGAAGATGGTATTTTTGAGGTCAAGTCAACTGCTGGAGACACTCAGCTTGGAGGCGAAG 68 Query 349881 ATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 ||||||| ||||| | |||| | ||||||| Sbjct 69 ATTTTGACAATCGAATGGTTTGGAATTTTGT 99 >seq53396 Length=249 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 || |||||||| || || | || || || ||| |||| | || || ||||| || || Sbjct 22 TCGAAATCTTCGCCTCCAAGGTGAGTGTCTCCAACAGTCGACTTGACCTCAAAAATACCA 81 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 ||||||||| | ||||| || || ||||| || ||||||||||| |||||| Sbjct 82 TCTTCAATAGTCAAAATAGACACGTCAAAAGTTCCACCACCCAAGTCAAAA 132 >seq35022 Length=540 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579 ||||||||| || |||||||| ||| |||||||| | | ||||||||||||||||| Sbjct 220 AAACAATTTGCTCCAGAAGAAATCTCAGCAATGGTTCTTGGAAAAATGAAGGAAATTGCC 161 Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 ||||| ||||| ||| | ||| || ||||||| |||| || Sbjct 160 GAAGCCTATTTGGGTCATGAAGTTACGCATGCTGTGGTTACGGT 117 >seq27895 Length=774 Score = 84.2 bits (92), Expect = 7e-11 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 ||||||||||||| |||||| ||||| || || | ||||| |||||||||||||| Sbjct 173 ATATAACCAGTTTCTGCAGTTTTTACTGCTGTGTCTACCAAACCTTCACGACCACCCATT 114 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA-AATGAACTCTCAATAAATCC 378350 | || |||| ||||| || ||||||||||| | || || ||| | || | || || Sbjct 113 GTGTGAAAGATAAATTCTGTTGGAGTAAGTCC-GGAGTAGAAAGAATTTTCTACGAACCC 55 Query 378351 TCTTGCGCCTGGCGAATCATCA-TATTTTGTATAATGAGGTAATGTACGATTCT 378403 | || |||| || |||| || || | |||||||||||| ||||||| Sbjct 54 CTTAGCATCTGGAGATCGATCATTACATTCGA-AATGAGGTAATGAGCGATTCT 2 >seq14119 Length=1895 Score = 84.2 bits (92), Expect = 7e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 67945 TATCATCACGGTGAAGCTAGTTTAAATTCATCAATTGTAGGTTTAGCTCAGAATTTTGTT 68004 |||||||| || ||| |||| ||| ||||||| ||| ||||| |||| |||| Sbjct 1891 TATCATCATGGAGAACAATCATTAATGTCAACAATTGTGAATTTGGCTCAAAATTATGTT 1832 Query 68005 GGATCAAATAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGA 68064 || || ||||| || ||| || || || | ||||||||||| ||| |||||| ||| Sbjct 1831 GGCTCTAATAACATCAATCTATTAATGCCTATTGGTCAATTTGGTACTCGATTACAAGGA 1772 Query 68065 GGAAAAGAT 68073 ||||||||| Sbjct 1771 GGAAAAGAT 1763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514114864292888