Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_028796.1 Length=49203 Score E Sequences producing significant alignments: (Bits) Value seq5531 87.8 6e-13 >seq5531 Length=4352 Score = 87.8 bits (96), Expect = 6e-13 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 41920 CGGCCCGAGCGGCTCGACCAGCCGCTCCGCTGGAAACGCCCGCGCCGCATCTTCGTGAAC 41979 ||||| ||||| |||| ||||||||| ||||| || || || |||||||||||| Sbjct 266 CGGCCTGAGCGCCTCGCCCAGCCGCTGGCATGGAAGCGGCCCCGGATGATCTTCGTGAAC 207 Query 41980 AGCATGGCCGACCTGTTTCACGACCAGGTGCCCGACGACTACATCGCCCGCGTGTTCGCC 42039 |||| | |||||||| ||| | ||||||||| | ||| | || || |||| | Sbjct 206 TCCATGTCGGACCTGTTCCACAAGAAGGTGCCCGGTACATTCATTGACCAGGTCTTCGAC 147 Query 42040 GTCATGGCGCTCTCAGACCGCCACACCTTCCAGGTGCTCACCAAGCGC 42087 |||| || | ||| | || |||||||||||| ||||||||| Sbjct 146 ACGATGGAGCAGGCCGACTGGCATGTCTTCCAGGTGCTGACCAAGCGC 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157218340024080