Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq3076 104 2e-17 >seq3076 Length=6201 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 126059 TTGTGTATGTATTGCATCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAAT 126118 |||||| | || || || | ||| | ||||||||||| ||||| |||| ||||||||| Sbjct 4224 TTGTGTTTTTAAAGCCTCTAAATGTGTAGAATAAATATGAGCATCACCAAGTGTATGAAT 4165 Query 126119 GAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACT 126178 ||||||||| | | |||||| | | | || | | ||| || ||||| | |||||| Sbjct 4164 AAATTCACCCGCTTTAAGTCCTGTTACATGAGCGATCATATGAGTAAGTAATGAATAACT 4105 Query 126179 TGCAATATTGAAAGGAACACCTAAA 126203 || |||||||||||||| |||||| Sbjct 4104 GGCTATATTGAAAGGAACGCCTAAA 4080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408306106070072