Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3537 98.7 7e-16 >seq3537 Length=5734 Score = 98.7 bits (108), Expect = 7e-16 Identities = 105/135 (78%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 23606 TTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 ||||| ||||||||||| || || || ||||| |||||||| || |||||||| ||||| Sbjct 3387 TTAAATATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAG 3328 Query 23665 TCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 | | || || |||| ||| |||| |||||| || || ||||| ||| | ||||| Sbjct 3327 GCTTCTGATACCATTGAGAATGTTAAGGCAAAAA-TTCAAGATAAAGAGGGTATCCCGCC 3269 Query 23724 AGATCAACAGCGTTT 23738 |||||||||||||| Sbjct 3268 TGATCAACAGCGTTT 3254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337767802297568