Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2460 95.1 1e-14 >seq2460 Length=57425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 19068 GGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACA 19127 || || || ||||| || || | ||| || | |||||| | || | || ||||| || Sbjct 47446 GGCGTCCCCTTCAATATAGCCAGTTATTCATTACTTACCCATATGATTGCTCATGTAACC 47505 Query 19128 GGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCAT 19187 ||||||||| | || || || ||||||||| | || |||||||||||||| | | ||| Sbjct 47506 GGACTTAAAGCTGGTGAATTTATTCATACACTTGGTGATGCACATATTTATTCTACACAT 47565 Query 19188 ATAGATGCTTTAAAA 19202 ||||| ||||||||| Sbjct 47566 ATAGAAGCTTTAAAA 47580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399487202105250