Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1894 84.2 4e-11 >seq1894 Length=37626 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/216 (69%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGA-TGCAAAGCAATAACG---ATTTGGC 101907 |||||||| |||| | |||||| || ||||| ||| | || || |||||| Sbjct 17965 ATCAAGAAAAAGGCTGATTGGGCTCTTCGTTGGACTGCCAGTAAAGAAGCTTCATTTGGA 18024 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 | ||| || |||| |||||| ||||||||||||| || || ||| || || | Sbjct 18025 G-AACGTCTTATTGCATTTGCTTCAGTTGAAGGAATATTTTTCTCTGGAAGTTTTGCTGC 18083 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 ||||| ||| | ||||| | ||| || ||||||| | || ||||| || || Sbjct 18084 AATTTTTTGGTTGAAGAAACGTGGTCTTATGCCTGGATTGACACAAAGTAATGAATTAAT 18143 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATG 102063 |||| | || |||||||||||||| || ||||| || Sbjct 18144 TTCTCGTGATGAAGGTCTTCATCGGGATTTTGCTTG 18179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989540257294750