Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1894 98.7 1e-15 >seq1894 Length=37626 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 ||||| |||||||| | ||| | ||||||||| | | |||||||||||| ||| Sbjct 18182 AAACAAGCAAAATCCCGATGAAGACCTTCATCACGAGAAATTAATTCATTACTTTGTGTC 18123 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAG 21592 || || ||||| | || | || || |||||||| |||| ||||| ||| || || Sbjct 18122 AATCCAGGCATAAGACCACGTTTCTTCAACCAAAAAATTGCAGCAAAACTTCCAGAGAAA 18063 Query 21593 AAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTA 21649 || || || ||||| | ||||||||||| | ||||| || ||| || ||||||| Sbjct 18062 AATATTCCTTCAACTGAAGCAAATGCAATAAGACGTTCTCCAAATGAAGCTTCTTTA 18006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531877861778000