Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1894 118 3e-21 >seq1894 Length=37626 Score = 118 bits (130), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGA-TG--AACAATGAACGTTCATTCGCG 22488 || ||||| ||||| |||||||| || |||| || | || ||| |||||| | Sbjct 17965 ATCAAGAAAAAGGCTGATTGGGCTCTTCGTTGGACTGCCAGTAAAGAAGCTTCATTTGGA 18024 Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 ||||||||||||||||||||| |||||||| || || || |||||| ||| |||| Sbjct 18025 GAACGTCTTATTGCATTTGCTTCAGTTGAAGGAATATTTTTCTCTGGAAGTTTTGCTGCA 18084 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || |||||| | || ||||||| ||||||| || | || ||||| |||||| Sbjct 18085 ATTTTTTGGTTGAAGAAACGTGGTCTTATGCCTGGATTGACACAAAGTAATGAATTAATT 18144 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||||| ||||||||| |||||||| ||| Sbjct 18145 TCTCGTGATGAAGGTCTTCATCGGGATTTTGCTTGT 18180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303295987697900