Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2855 91.5 2e-13 >seq2855 Length=35860 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 46409 TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAG 46468 || ||||||||||| | | || || | || || | |||||| |||||||| || | | Sbjct 31833 TGAATATTGTAGTCAGCCAACGTTCGACCATCCTCCAACTGCTTCCCGGCGAAGATGAGG 31892 Query 46469 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACC 46528 || ||||| || | || | | |||||| ||| |||||| ||||| || | | Sbjct 31893 CGTTGCTGCTCTGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 31952 Query 46529 GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATT 46588 ||||| | |||||||||| ||||| || || || || |||||||| ||||||| | Sbjct 31953 GTGTCCGACTGCTCCACATCCAGAGTGATCGTCTTCCCGGTGAGCGTTTTGACAAAGACT 32012 Query 46589 TGCAT 46593 ||||| Sbjct 32013 TGCAT 32017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565214024094000