Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29]
3,450 sequences; 53,012,960 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3048 104 3e-17
>seq3048
Length=35267
Score = 104 bits (114), Expect = 3e-17
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTT-TCGCGAGCGACTTCAAAGAG 16123
||||||||||||||||| |||| || || || |||||| | || || | ||| || |
Sbjct 1744 GCATCAATCTCATCAATAAAGAGAATACACGG-TGATTTCTTCCGTGCCATTTCGAACAT 1802
Query 16124 ATCCCGTACACG-CTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182
||| | |||||| | ||| ||| ||||||||||||||||| | ||| | | | | |||
Sbjct 1803 ATCTCTTACACGTCCTGG-GCCAACACCAACAAACATCTCAAGAAACTCCGAGCCAGAAA 1861
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
|||||||||||||| | || || || | ||| |||||| | || || || |
Sbjct 1862 CGGTTATGAAGGGGACATTCGCCTCTCCTGCTGTAGCTTTGGCGAGCAATGTTTTGCCGG 1921
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACC 16270
| |||||| ||| | ||||||||| ||
Sbjct 1922 TTCCTGGCGGACCAGTGAGGAGGGCGCC 1949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620715630484000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |