Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1807 93.3 6e-14 >seq1807 Length=32432 Score = 93.3 bits (102), Expect = 6e-14 Identities = 112/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 155806 AAAATTTATGTAATAAA-ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACA 155864 |||| ||| | | |||| ||||| || ||| | || || | || ||||||||||||||| Sbjct 20962 AAAAATTAAGCATTAAATATGCAGATTTTTGTCAAGACTCTCACCGGAAAAACTATTACA 21021 Query 155865 TTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAA 155924 | ||||| || | |||||||| |||| ||| || || ||||| |||||||| || Sbjct 21022 CTCGAAGTTGAGGCTTCTGATACTATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAG 21081 Query 155925 GGCATACCTCCAGAACAACAAAGATTGATTT 155955 ||||| || || || ||||| | ||| ||| Sbjct 21082 GGCATCCCGCCTGATCAACAGCGTTTGGTTT 21112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731840438020000