Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1894 104 4e-17 >seq1894 Length=37626 Score = 104 bits (114), Expect = 4e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 39120 AGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAA 39179 |||||||| ||||||||| ||| | |||||| || | ||| || ||||||||||| Sbjct 18185 AGTAAACAAGCAAAATCCCGATGAAGACCTTCATCACGAGAAATTAATTCATTACTTTGT 18126 Query 39180 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 39239 || ||||| ||||| | || | || || | |||||| |||| |||||||| | ||| Sbjct 18125 GTCAATCCAGGCATAAGACCACGTTTCTTCAACCAAAAAATTGCAGCAAAACTTCCAGAG 18066 Query 39240 AAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAA 39286 || ||||| || || || | |||||||| || | | | ||||||| Sbjct 18065 AAAAATATTCCTTCAACTGAAGCAAATGCAATAAGACGTTCTCCAAA 18019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905096966010000