Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1866 102 1e-16 >seq1866 Length=36513 Score = 102 bits (112), Expect = 1e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 116420 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTAAAAGAAGAACTTAAACATTTTCA 116479 ||||||||| | ||||| || | || ||||||||| | ||||| ||||||||||| Sbjct 9912 TGGAATTGGTAAAAATAATTCTTTGCCATGGAAATTACCAAAAGAATTTAAACATTTTAT 9971 Query 116480 AGATGTTACGACTTCTACCCAAGATAGTAGTaaaaaaaaCGCTGTTATTATGGGTCGGAA 116539 || | || || || || || | ||||| || |||||| | ||||| | || Sbjct 9972 TAATTTAACAACAAAAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGCAGAAA 10031 Query 116540 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 116593 | ||||| ||||||||| | || ||| |||||||||||||||||||||||| Sbjct 10032 ATGTTGGGAAAGTATTCCTGAAAATTTTCGACCATTAAAAAATCGAATAAATAT 10085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635150207966000