Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1866 111 2e-19 >seq1866 Length=36513 Score = 111 bits (122), Expect = 2e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 116911 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116970 ||||||||| | ||||| || | || |||||||| | ||||| ||||||||||| Sbjct 9912 TGGAATTGGTAAAAATAATTCTTTGCCATGGAAATTACCAAAAGAATTTAAACATTTTAT 9971 Query 116971 AGATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 117030 || | || || ||| || || | ||||| ||||||||| | ||||| |||| Sbjct 9972 TAATTTAACAACAAAAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGCAGAAA 10031 Query 117031 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 117084 | ||||| ||||||||| | || ||| |||||||||||||||||||||||| Sbjct 10032 ATGTTGGGAAAGTATTCCTGAAAATTTTCGACCATTAAAAAATCGAATAAATAT 10085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628504094592000