Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3048 104 3e-17 >seq3048 Length=35267 Score = 104 bits (114), Expect = 3e-17 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTT-TCGCGAGCGACTTCAAAGAG 9762 ||||||||||||||||| |||| || || || |||||| | || || | ||| || | Sbjct 1744 GCATCAATCTCATCAATAAAGAGAATACACGG-TGATTTCTTCCGTGCCATTTCGAACAT 1802 Query 9763 ATCCCGTACACG-CTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 9821 ||| | |||||| | ||| ||| ||||||||||||||||| | ||| | | | | ||| Sbjct 1803 ATCTCTTACACGTCCTGG-GCCAACACCAACAAACATCTCAAGAAACTCCGAGCCAGAAA 1861 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 |||||||||||||| | || || || | ||| |||||| | || || || | Sbjct 1862 CGGTTATGAAGGGGACATTCGCCTCTCCTGCTGTAGCTTTGGCGAGCAATGTTTTGCCGG 1921 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACC 9909 | |||||| ||| | ||||||||| || Sbjct 1922 TTCCTGGCGGACCAGTGAGGAGGGCGCC 1949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235646878000