Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3337 208 2e-48 seq2172 199 1e-45 seq3420 149 2e-30 seq2860 116 1e-20 seq1983 114 4e-20 seq1807 114 4e-20 seq2611 107 6e-18 seq2492 107 6e-18 seq2352 107 6e-18 seq3097 104 7e-17 seq3323 98.7 3e-15 seq1956 96.9 1e-14 seq2045 93.3 1e-13 seq2498 87.8 5e-12 seq3431 86.0 2e-11 seq3282 84.2 7e-11 seq3106 84.2 7e-11 >seq3337 Length=92621 Score = 208 bits (230), Expect = 2e-48 Identities = 262/360 (73%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 349542 TTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAG 349601 |||| | |||||||| || || |||||||| | ||||||||| | ||| || |||| | Sbjct 79982 TTTCTGCTATGGTTTTGGTCAAGATGAAGGAGACTGCTGAAGCGTTTTTGGGGCAAACTG 80041 Query 349602 TAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAA 349661 | | ||||| || ||||| || || ||||| || || ||| ||| || || || | Sbjct 80042 TTAAGGATGCAGTAATTACGGTGCCTGCCTACTTCAACGATAGCCAACGACAGGCTACCA 80101 Query 349662 AAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTG 349721 | |||||||| | || | ||| | |||||| | |||| || || ||||| || || | Sbjct 80102 AGGATGCTGGAACAATCTCTGGGCTTAATGTTTTGCGAATCATCAACGAACCGACCGCCG 80161 Query 349722 CAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTG 349781 | || ||||| ||||| | ||||| | | || | ||| || | || || |||| Sbjct 80162 CTGCTATTGCTTATGGCTTGGATAAGAAGGGTCAAGGAGAGCGGAACGTCCTGATATTTG 80221 Query 349782 ATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAG 349841 |||| || || || || ||||| || || | || || ||||||| ||||||||||| | Sbjct 80222 ATTTGGGCGGCGGGACCTTTGACGTTTCTATTCTGACTATTGAAGATGGAATTTTTGAGG 80281 Query 349842 TTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTT 349901 | ||| |||||||||| ||||| ||||||||||| ||||||||||| ||||| | |||| Sbjct 80282 TCAAATCAACTGCTGGAGATACTCATCTTGGTGGTGAAGATTTTGACAATCGAATGGTTT 80341 Score = 141 bits (156), Expect = 3e-28 Identities = 221/311 (71%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||||||||||||||| |||||||| ||||||| | || || |||||||| Sbjct 80555 ATTGAAATTGATTCTCTCTTTGATGGCATTGATTTCTACACCAACATCACTCGTGCTCGT 80614 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTAT- 350147 ||||| || | || ||| | || | |||| | |||||||| || || || || | Sbjct 80615 TTTGAGGAGCTTTGCGCTGATTTGTTCCGCAGCA-CTATGGATCCGGTTGAGAA-GTCTA 80672 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 | ||||| |||||| |||| || ||| |||| | ||| | |||||||| || | Sbjct 80673 TCCGCGATGCGAAAATGGACAAATCGCAAATTCATGATATTGTTCTTGTTGGTGGATCGA 80732 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267 | || ||||||||||||||| | | | || || || || ||| || || | || Sbjct 80733 CTCGAATTCCAAAAGTTCAAAAACTTTTGTCCGACTTCTTCTCTGGGAAGGAGCTCAATA 80792 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTAT 350327 | || |||||||| ||||||||||||||||| |||||||||||||| |||| | | Sbjct 80793 AAAGTATCAATCCAGACGAAGCTGTTGCATATGGAGCTGCTGTTCAGGCTGCTATCCTGT 80852 Query 350328 CTGGAAATAAG 350338 |||| ||||| Sbjct 80853 CTGGTGATAAG 80863 Score = 109 bits (120), Expect = 2e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||||||||||||||| | ||| ||||| |||||||| | ||| || ||||| ||||| Sbjct 80327 TCAAAATCTTCACCACCAAGATGAGTATCTCCAGCAGTTGATTTGACCTCAAAAATTCCA 80268 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||||||||| | | ||| || || ||||| || || || ||||||||||| Sbjct 80267 TCTTCAATAGTCAGAATAGAAACGTCAAAGGTCCCGCCGCCCAAATCAAA 80218 >seq2172 Length=48972 Score = 199 bits (220), Expect = 1e-45 Identities = 261/357 (73%), Gaps = 11/357 (3%) Strand=Plus/Minus Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 || ||| ||| ||| ||||||| ||| | || | |||| ||||||||| ||| Sbjct 14858 TTTAAAGGAAACAAACATCTGAAGCTTATCTTGGACATCCAGTTCGTGATGCTGTAGTTA 14799 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG-CAGCATT 349678 |||| || || ||||||||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 14798 CTGTTCCTGCATATTTTAATGATGGGCAGCGTCAAGCAACTAAAGATGCGGGTCAG-ATT 14740 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | |||||| | |||| ||||||||||| || ||||| || | || ||||| Sbjct 14739 GCTGGTCTTAATGTTTTGCGAATTATTAATGAACCAACGGCTGCTGCTTTGGCTTATGGA 14680 Query 349739 CTTGAT---AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | ||| |||||||| | || | ||||||||||||||||| | ||||||||| Sbjct 14679 TTGGATAAGAAAATGAGAG---GGGATCAGAATATTCTTATTTTTGACCTTGGTGGTGGT 14623 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAACT 349852 ||||| ||||| || | | || ||| ||||| | |||||||||||| |||| Sbjct 14622 ACTTTCGATGTTTCTGTTTTGGCAATTGCTGAGGGTTCTTTGTTTGAAGTTAAATCAACA 14563 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 |||||||| || ||| | || ||||| |||||||||||| || ||| |||||| Sbjct 14562 GCTGGTGACACTCATTTGGGAGGAGAGGATTTTGATAATTTGCTTGTTGAACATTTT 14506 >seq3420 Length=116350 Score = 149 bits (164), Expect = 2e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567 || |||||| ||||||||| || ||||| || ||| |||||||| | | || ||| Sbjct 6891 AATGGTGAAACTAAACAATTTGCTCCAGAAGAGATCTCAGCAATGGTTCTTGGAAAGATG 6832 Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627 ||||||||||| ||||| ||||| ||| | ||| | |||||||| | || || || Sbjct 6831 AAGGAAATTGCCGAAGCCTATTTGGGTCATGAAGTTAAGCATGCTGTTGTAACCGTTCCC 6772 Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687 ||||| ||||| ||||| || ||| || || ||||||||||| | || | || || Sbjct 6771 GCCTACTTTAACGATGCTCAACGTCAAGCTACCAAAGATGCTGGAACAATCTCTGGTTTG 6712 Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||||| | | || ||||||||||| || ||||| || ||||| ||||| Sbjct 6711 AATGTTGTGCGTATTATTAATGAACCGACAGCTGCTGCTATTGCTTATGG 6662 >seq2860 Length=84313 Score = 116 bits (128), Expect = 1e-20 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 || || ||||||||||| || || |||||||| ||||| || || ||||| || || ||| Sbjct 77580 AGGCGCTGCTGATCAGGTGGGATCCCTTCTTTGTCCTGGATCTTGGCTTTGACGTTTTCA 77639 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || |||| ||| |||||||| || | |||||||| || | ||| ||||||||| Sbjct 77640 ATAGTGTCTGATGCTTCCACTTCAAGGGTGATGGTCTTTCCCGTCAATGTCTTTACAAAA 77699 Query 140730 ATCTGCATT 140738 ||||||||| Sbjct 77700 ATCTGCATT 77708 Score = 109 bits (120), Expect = 2e-18 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || |||||||| |||||||| ||||| || || |||||||| || || ||||| || || Sbjct 78402 CGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATA 78461 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | || |||||||| || | ||||||||||| || || ||||| || ||| Sbjct 78462 GTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTTCCGGTAAGAGTCTTTACGAAGATC 78521 Query 140733 TGCAT 140737 ||||| Sbjct 78522 TGCAT 78526 Score = 104 bits (114), Expect = 7e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 140612 ACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAAT 140671 ||| || ||||| || ||||| ||||| || ||||||||||| ||||| ||||| || || Sbjct 77313 ACGCTGTTGATCTGGCGGAATACCTTCCTTGTCCTGAATTTTGGCTTTGACATTTTCGAT 77372 Query 140672 CGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAAT 140731 | ||||||| |||||||| || || | ||||| || || || ||||| ||||| || Sbjct 77373 AGTGTCAGATGCCTCAACTTCGAGGGTGATAGTCTTCCCTGTCAGAGTTTTCACAAAGAT 77432 Query 140732 CTGCATT 140738 |||||| Sbjct 77433 TTGCATT 77439 Score = 95.1 bits (104), Expect = 4e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 |||||||||||||| |||||||||||||| || ||||| || || || || || ||||| Sbjct 78127 CGTTGCTGATCAGGTGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCAATG 78186 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | || || | |||||||| || || | || || || || || || || || |||||| Sbjct 78187 GTGTCGGAAGACTCAACTTCGAGCGTGATGGTTTTCCCAGTAAGCGTCTTGACGAAAATC 78246 Query 140733 TGCAT 140737 ||||| Sbjct 78247 TGCAT 78251 Score = 89.7 bits (98), Expect = 2e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || | ||||||||| ||||| || || || || |||||||| || Sbjct 78249 CATACCACCACGAAGTCGCAAAACAAGATGGAGAGTCGATTCCTTCTGGATATTATAGTC 78308 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 || | || ||||| || ||||| || |||||||||||||| Sbjct 78309 AGCAAGGGTGCGCCCGTCCTCAAGCTGCTTTCCAGCAAAGAT 78350 Score = 84.2 bits (92), Expect = 7e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | || | |||||||||||||| || || || || || |||| Sbjct 77973 TTTGCATCCCACCACGAAGTCGCAACACAAGATGAAGAGTCGATTCCTTCTGGATGTTAT 78032 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT 140608 |||||| | || || ||||| ||||| ||||| ||||| ||||| Sbjct 78033 AATCAGCAAGAGTACGTCCATCCTCAAGCTGTTTACCAGCGAAGAT 78078 >seq1983 Length=15124 Score = 114 bits (126), Expect = 4e-20 Identities = 191/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 || |||||||| || || |||||| || || ||| || ||||| ||||||||| Sbjct 9140 TGATCAATATAACGTGCCACAGAATTAAAAACTTGTAACATCGGTATAATTCCATTAGAA 9081 Query 206509 GTTCCATTTGTTCCTCTAATATGACTG--CCAGTCCCTCTAATATTATGTATATGTAATC 206566 |||||||||| || |||| | | |||| | | ||| ||| || | || Sbjct 9080 TTTCCATTTGTGCCAG--ATATCAAAGAACCAGCAGCACGAATTGAATGAATGGAAAGTC 9023 Query 206567 CAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCAT 206626 |||||||||| ||| |||||||||||| ||||| || | ||| | | ||||||| | Sbjct 9022 CAATTCCTCCAGCCGATTTTGAAATATATGCACAACGATTAATTGTTTCAAAAATTCCTT 8963 Query 206627 CAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTC 206686 ||| |||| |||| | || ||||||||||||| | |||||| ||| || | Sbjct 8962 CAATTGAGTCACCAACCATTGAAAGTAAAAAACAAGAAGAAAGTTGTGGACGTTTTGTAC 8903 Query 206687 CAGCATTAAATAAAGTAGGAGTAGCATGTGTAAA 206720 | ||||| |||||||| |||| ||| || || || Sbjct 8902 CCGCATTGAATAAAGTTGGAGAAGCGTGAGTGAA 8869 >seq1807 Length=32432 Score = 114 bits (126), Expect = 4e-20 Identities = 195/293 (67%), Gaps = 46/293 (16%) Strand=Plus/Minus Query 140491 TCAAACTAATATTTTACATA-CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCT 140549 ||||| |||| || || | ||||| || | | || || | |||||| || || || Sbjct 21272 TCAAAAAAATAATTGACCTTTCCACCGCGAAGACGTAAGACCAAATGAAGGGTGGATTCC 21213 Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGAT- 140608 || || || |||||||||| ||| ||||||||||| |||||||| || ||||||||||| Sbjct 21212 TTCTGGATGTTATAATCAGCTAAAGTTCGCCCATCCTCAAGTTGCTTACCAGCAAAGATC 21153 Query 140609 ------TAG--------------------------------------ACGTTGCTGATCA 140624 ||| ||| || |||||| Sbjct 21152 TAAAAATAGAACCCTGCAAGTAAACTTAGAAAAAATATACAAACCAAACGCTGTTGATCA 21093 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || || || || ||||| |||||||| || || ||||| ||||| | |||||| | Sbjct 21092 GGCGGGATGCCCTCCTTATCTTGAATTTTGGCCTTAACATTTTCAATAGTATCAGAAGCC 21033 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| ||||||| || |||||||| || || || |||||||||||||| Sbjct 21032 TCAACTTCGAGTGTAATAGTTTTTCCGGTGAGAGTCTTGACAAAAATCTGCAT 20980 >seq2611 Length=17818 Score = 107 bits (118), Expect = 6e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 67897 GAAATTAAAGTTGCACAATTTAGTGGTTATGTTTCAGAACATTCAGGCTATCATCACGGT 67956 ||| | ||||| |||||||| |||| |||| ||| || | ||||||||||| Sbjct 10376 GAAGTCAAAGTAGCACAATTGGCTGGTGCTGTTGGTGAAATGTCGGCATATCATCACGGA 10317 Query 67957 GAAGCTAGTTTAAATTCATCAATTGTAGGTTTAGCTCAGAATTTTGTTGGATCAAATAAT 68016 ||| |||| ||| ||||| | | | ||||| ||||||||||| || |||||| Sbjct 10316 GAACAATCATTAATGTCAACAATTATGAATCTGGCTCATAATTTTGTTGGCTCTAATAAT 10257 Query 68017 ATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGAGGAAAAGATGCT 68076 || ||| || || ||||| ||||||||||| ||| | |||| ||||| |||||| || Sbjct 10256 ATCAATCTATTAATGCCAAATGGTCAATTTGGTACTCGTTTACAAGGAGGGAAAGATTCT 10197 Query 68077 GCATCTGAAAGATATATATTTACACATCTAAA 68108 || || | ||||| ||||| || || || Sbjct 10196 GCTTCGCCTCGTTATATTTTTACTCAACTCAA 10165 >seq2492 Length=23551 Score = 107 bits (118), Expect = 6e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 54809 GATGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAA 54868 ||||| ||| ||||||||||||||||| ||||| |||||| ||| | || ||||| Sbjct 2291 GATGAAGATCCTTTTCATTGGCAAGCAATTATTATCGGACCACCTGATTCTCCATATCAG 2350 Query 54869 GGTGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAAT 54928 ||||| | ||| | |||| | || ||||||||||||||||| |||| ||| || | Sbjct 2351 GGTGGAGTCTTTTACTTAACATACGACTTTCCACAAGATTATCCGTTTAGACCACCGAGG 2410 Query 54929 GTAGTTTTTACTACAAAGATTTATCAT 54955 ||||| ||||| ||| || |||||| Sbjct 2411 GTAGTGTTTACGACACGCATATATCAT 2437 >seq2352 Length=49960 Score = 107 bits (118), Expect = 6e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || |||||||| || ||||| ||||| || || |||||||| ||||| ||||| ||||| Sbjct 37632 CGCTGCTGATCTGGCGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATA 37691 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | ||||| | ||||||||||| || | |||||||| || | ||||| ||||| ||| Sbjct 37692 GTGTCAGAGGCCTCAACTTCAAGAGTGATGGTCTTTCCAGTCAAAGTTTTCACAAAGATC 37751 Query 140733 TGCA 140736 |||| Sbjct 37752 TGCA 37755 Score = 102 bits (112), Expect = 2e-16 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || ||||| || ||||| ||||||||||| || || || || ||| Sbjct 37901 AGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCA 37960 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| || || | || |||||||| || | ||||||||||| | || || |||||| Sbjct 37961 ATCGTGTCCGAGGCCTCTACTTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTAACAAAA 38020 Query 140730 ATCTGCATT 140738 || |||||| Sbjct 38021 ATTTGCATT 38029 Score = 100 bits (110), Expect = 9e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||| || || || || || || || || ||||||||||| || ||||| ||||| Sbjct 38443 CGCTGCTGGTCCGGCGGGATACCCTCCTTGTCTTGAATTTTAGCCTTGACATTTTCAATG 38502 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | |||||||||||| || | |||||||| || | ||||| || || ||| Sbjct 38503 GTATCAGAGGCTTCAACTTCAAGAGTGATAGTCTTTCCAGTCAACGTTTTCACGAAGATC 38562 Query 140733 TGCAT 140737 ||||| Sbjct 38563 TGCAT 38567 >seq3097 Length=162332 Score = 104 bits (114), Expect = 7e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || || || || || ||||| || || || || ||||||||||| || ||||| ||||| Sbjct 137009 CGCTGTTGGTCTGGCGGAATACCCTCCTTGTCTTGAATTTTAGCCTTGACATTTTCAATG 137068 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | ||||| | |||||||||||| |||| || || ||||||| || || ||||||||| Sbjct 137069 GTGTCAGAAGCTTCAACTTCAAGCGTAATCGTTTTGCCGGTTAAAGTCTTAACAAAAATC 137128 Query 140733 TGCAT 140737 ||||| Sbjct 137129 TGCAT 137133 >seq3323 Length=204521 Score = 98.7 bits (108), Expect = 3e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 130745 AAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGATTTACA 130804 || |||||||||||||||||| || ||||| ||||| |||| |||||| ||| | |||| Sbjct 154137 AACCATAACAAAATCAGCTCCAGCCCCAAAGGCTTTAGCAACATCCCCTGGACAGGTACA 154078 Query 130805 ACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCTGAAAT 130864 ||| ||||| ||||| ||| || || ||||| || ||||| | ||| || ||| Sbjct 154077 ACCACCATCGCTAATAATATGACCTCCCAAACCATGAGCAGCATCTGAACATTCCAAAAC 154018 Query 130865 AGCAGAAAGTTGTGGATATCCAACTCC 130891 |||| | |||||| || || || || Sbjct 154017 AGCACTGAATTGTGGGTAGCCGACACC 153991 >seq1956 Length=35408 Score = 96.9 bits (106), Expect = 1e-14 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 ||||||||||| | ||| || || || || || | || || |||||||||||||| Sbjct 26193 ATATAACCAGTCTCTGCAGTCTTTACCGCTGTGTCCACCAATCCTTCACGACCACCCATT 26134 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA-AATGAACTCTCAATAAATCC 378350 | || |||| ||||| || |||||||||||| |||| || ||| | || | || || Sbjct 26133 GTGTGAAAGATAAATTCTGTTGGAGTAAGTCCAG-AATAGAAAGAATTTTCCACGAAACC 26075 Query 378351 TCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 |||| |||| || ||||| || | | |||||||||||| |||||||| ||| Sbjct 26074 CTTTGCATCTGGAGAGCGATCATTTTGTTCAAAATGAGGTAATGAACGATTCTAAAA 26018 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 377449 TCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGG 377508 |||| ||| || ||||| || |||||| |||| |||| |||||||||||||||||| Sbjct 27201 TCTTTAATTCGAGGCACTCCTTGTGTAATATTCA---TAGAAGCAACACCAGCAAAGTGG 27145 Query 377509 AAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGA 377549 ||||| || | ||| | ||| |||| || ||||||||||| Sbjct 27144 AAAGTTTTCAAAGTCATTTGTGTAGAAGGTTCACCAATTGA 27104 >seq2045 Length=13469 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 54810 ATGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAG 54869 |||||||| |||| |||||||||| ||||||||||||||| | || | || ||| | Sbjct 12657 ATGATGATCCTTTTAATTGGCAAGCTACAATTATGGGACCACCAAATTCTCCCTATTTTG 12598 Query 54870 GTGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATG 54929 | || | ||| || | ||| | ||| | |||||||||| |||||||| ||||||| Sbjct 12597 GAGGAGTGTTTTTCTTGAATATTAAATTTTCTGAAGATTATCCGTTTAAACCACCAAATG 12538 Query 54930 TAGTTTTTACTACAAAGATTTATCAT 54955 | ||||| |||| ||||| ||| Sbjct 12537 TGACTTTTATTACACCAATTTACCAT 12512 >seq2498 Length=59642 Score = 87.8 bits (96), Expect = 5e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 378175 ACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATA 378234 ||||| ||| || ||| ||| | | ||| | |||||||| || || || || Sbjct 46616 ACAGTTCCATCGTAGTTAATCATCACACTTTCCATAGCTTTAATCAGACGACGTTGGATG 46557 Query 378235 TAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCA 378294 |||||||||| ||||||||| || |||||||| || || |||| ||||||||||| Sbjct 46556 TAACCAGTTTCTGCAGTTTTAACAGCTGTATCAATCAATCCTTCACGTCCACCCATTGCG 46497 Query 378295 TGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCC 378350 || || || ||||| | ||| ||||| || | | | |||| | |||| ||| || Sbjct 46496 TGAAAAAAGAATTCGGAAGGCGTAAGACCGGCCAAATATGAGTTTTCAACAAAACC 46441 >seq3431 Length=10293 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/122 (77%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 423761 TAAGAGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGGCG---AAA 423817 ||||||| || || ||||||||| ||||| | ||||||||||||||| ||||| | Sbjct 6135 TAAGAGCGAGGTTGTCCGAGTGGT-TAAGGAGACAGACTTAAGATCTGTTGGCGTTCATC 6193 Query 423818 GCCTCGTGGGTTCAAACCCCACTCCGTGCATTTATTATATAAGAGTAATCTTATAGTAAA 423877 ||| ||||||||| |||||||| || |||| |||| | ||| | | | ||| | |||| Sbjct 6194 GCCGCGTGGGTTCGAACCCCACACCTCGCATATATTTTTTAAAATT--TTTTAAATTAAA 6251 Query 423878 TA 423879 || Sbjct 6252 TA 6253 >seq3282 Length=184692 Score = 84.2 bits (92), Expect = 7e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 266270 TTATACTCATTGTGAAATTCATCCAAGTACATTATTAGGTATTTTAGCATCTTGTATTCC 266329 ||| ||||||||||||||||||||| | | || ||| ||| || || |||||| Sbjct 15696 TTACACTCATTGTGAAATTCATCCAGCAATGATTTTGGGTGTTTGTGCTTCAATTATTCC 15637 Query 266330 ATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGC 266389 ||||||||| || |||||| || | || || ||| |||| ||||| ||||| || Sbjct 15636 ATTTCCAGACCACAATCAAAGTCCAAGAAATACTTACCAAAGTGCTATGGGAAAACAAGC 15577 Query 266390 TATGGGTATCTATGTTACAAATTTTAATAATAGAATGGATAAAACAGCATATGTTC 266445 ||||| | || ||||| || || | ||||||||| | ||| |||||| Sbjct 15576 GATGGGCGTTTACACAACAAACTTCCATGTTCGAATGGATACACTTGCACATGTTC 15521 >seq3106 Length=22939 Score = 84.2 bits (92), Expect = 7e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 54805 AATAGATGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTA 54864 ||| | ||||||| ||| |||||||||| ||||||| |||||| |||| | || || Sbjct 16929 AATCGGTGATGATCATTTCAATTGGCAAGCTACAATTACTGGACCACCAGATTCGCCTTA 16870 Query 54865 TCAAGGTGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCC 54924 ||| || || | ||| || | ||| | |||||| |||||||||||||||||| || Sbjct 16869 TCATGGAGGAGTGTTTTTCTTGAATATTAAATTTCCAACAGATTATCCATTTAAACCACC 16810 Query 54925 A 54925 | Sbjct 16809 A 16809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515187421020350