Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq2611 93.3 2e-14 >seq2611 Length=17818 Score = 93.3 bits (102), Expect = 2e-14 Identities = 120/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||||||||||||||||| ||| ||||| || || |||| |||||| Sbjct 10219 CGAGTACCAAATTGACCATTTGGCATTAATAGATTGATATTATTAGAGCCAACAAAATTA 10278 Query 65147 TGAGCC--ATTCCGATAATTGCTG-CATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 |||||| |||| ||||||| || |||| | | | ||| |||||||||||| | || Sbjct 10279 TGAGCCAGATTC--ATAATTGTTGACATTAATGATTG-TTCTCCGTGATGATATGCCGAC 10335 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTC 65244 |||| ||| ||| ||||| || ||||| | ||| Sbjct 10336 ATTTCACCAACAGCACCAGCCAATTGTGCTACTTTGACTTC 10376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235670090392500