Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2352 84.2 1e-11 >seq2352 Length=49960 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || | |||||| || ||||||||||||||||||||||| | Sbjct 37758 CCTCCACGAAGACGTAAAACAAGATGGAGTGTAGACTCCTTTTGAATGTTATAATCTGCA 37817 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATAT-TAAA 34581 || || || |||||||||| || || || || ||||| |||| Sbjct 37818 AGAGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAATATCTAAA 37860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314716366603850