Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq2460 102 7e-17 >seq2460 Length=57425 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 126060 TGTGTATGTATTGCATCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATG 126119 ||||| | || || || ||||| | ||||||||||||||||| |||| ||||||||| Sbjct 47585 TGTGTTTTTAAAGCTTCTATATGTGTAGAATAAATATGTGCATCACCAAGTGTATGAATA 47526 Query 126120 AATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTT 126179 |||||||| | | |||||| | | | |||| | ||| || ||||| | |||||| Sbjct 47525 AATTCACCAGCTTTAAGTCCGGTTACATGAGCAATCATATGGGTAAGTAATGAATAACTG 47466 Query 126180 GCAATATTGAAAGGAACACCTAAA 126203 || |||||||| || || |||||| Sbjct 47465 GCTATATTGAAGGGGACGCCTAAA 47442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408581219714150