Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq107 86.0 7e-12 >seq107 Length=131503 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 42999 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 43058 ||||||||||| ||||||| || || | || || | |||||| || ||||| ||||| Sbjct 116387 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAACTGCTTCCCTGCGAAGATGAGA 116328 Query 43059 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC 43118 || ||||| || | || | | |||||| ||| ||| || |||| || | | Sbjct 116327 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 116268 Query 43119 GTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATT 43178 ||||| | |||||||| | ||||| || || || || ||||| || ||||||| | Sbjct 116267 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 116208 Query 43179 TGCAT 43183 ||||| Sbjct 116207 TGCAT 116203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571731176917480