Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq2421 84.2 3e-11 seq1166 84.2 3e-11 seq1111 84.2 3e-11 seq618 84.2 3e-11 >seq2421 Length=20219 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 12266 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 12325 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 12326 GCTATAGAGGC 12336 >seq1166 Length=39706 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 27025 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 26966 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 26965 GCTATAGAGGC 26955 >seq1111 Length=41035 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 39470 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 39529 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 39530 GCTATAGAGGC 39540 >seq618 Length=60362 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 40760 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 40701 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 40700 GCTATAGAGGC 40690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746108018053840