Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq668 113 1e-19 >seq668 Length=57742 Score = 113 bits (124), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGA-TG--AACAATGAACGTTCATTCGCG 22488 || ||||| || || |||||||| || |||| || | || ||| |||||| | Sbjct 38494 ATCAAGAAAAAAGCTGATTGGGCTCTTCGTTGGACTGCTAGTAAAGAAGCTTCATTTGGT 38553 Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||||||||||| ||||| | ||||| || || ||||| |||||| ||| |||| Sbjct 38554 GAACGTCTTATTGCTTTTGCCGCAGTTGAGGGTATATTCTTCTCTGGAAGTTTTGCTGCA 38613 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || ||||||||||| ||||| | ||||||| || || || ||||| |||||| Sbjct 38614 ATTTTTTGGCTAAAGAAACGCGGTTTTATGCCTGGACTGACACAAAGTAATGAATTAATT 38673 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||||| || |||||| |||||||| ||| Sbjct 38674 TCTCGTGATGAAGGACTTCATCGAGATTTTGCTTGT 38709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303151689755162