Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2681 95.1 2e-14 seq7712 89.7 7e-13 seq2033 89.7 7e-13 >seq2681 Length=17795 Score = 95.1 bits (104), Expect = 2e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844 |||||||| |||||||||||||||||||| || | ||||| | || | |||||| ||| Sbjct 1566 TTTCCTGTAGCAATAACAAAATCATCAGGCTCATTATGTTGTAATATCATCCACATTGCC 1625 Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896 || ||||| || | ||||||||||| ||||| | |||| | ||| |||| Sbjct 1626 TCAACATATTCCCGAGCATGTCCCCAATCACGGCGAGCATTTATATTACCTA 1677 >seq7712 Length=3850 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844 |||||||| || |||||||||||||||||||| | ||||| | || | |||||| ||| Sbjct 132 TTTCCTGTAGCGATAACAAAATCATCAGGTTCATTATGTTGTAATATCATCCACATTGCC 191 Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896 || ||||| || | ||||| ||||| ||||| | |||| | ||| |||| Sbjct 192 TCAACATATTCCCGAGCATGCCCCCAATCACGGCGAGCATTTATATTACCTA 243 >seq2033 Length=24552 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844 |||||||| || |||||||||||||||||||| | ||||| | || | |||||| ||| Sbjct 20059 TTTCCTGTAGCGATAACAAAATCATCAGGTTCATTATGTTGTAATATCATCCACATTGCC 20118 Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896 || ||||| || | ||||| ||||| ||||| | |||| | ||| |||| Sbjct 20119 TCAACATATTCCCGAGCATGCCCCCAATCACGGCGAGCATTTATATTACCTA 20170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665393818840120