Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq362 98.7 1e-15 seq3649 91.5 1e-13 seq696 91.5 1e-13 seq32 91.5 1e-13 seq8938 89.7 5e-13 seq5909 87.8 2e-12 seq2189 87.8 2e-12 seq1361 87.8 2e-12 seq1136 87.8 2e-12 seq293 87.8 2e-12 >seq362 Length=81727 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 ||| || |||||||||||| || || || || ||||| || |||||||| ||| || Sbjct 42451 AAACCAGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATTTTAGCTTTCACAT 42510 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 || | || || || | |||||| || ||||| || |||||||| || |||||||| | Sbjct 42511 TCTCAATAGTATCCGAGGCTTCCACTTCAAGAGTGATAGTTTTACCAGTCAAAGTTTTGA 42570 Query 134701 CGAAAATTTGCATT 134714 | |||||||||||| Sbjct 42571 CAAAAATTTGCATT 42584 Score = 93.3 bits (102), Expect = 4e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 ||| || ||||||||| || || || || || ||||| ||||||||||| ||||| || Sbjct 42183 AAACCAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGA-CG 42241 Query 134641 CGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 | |||| || || || | || || |||||||| || || || || || || || ||| Sbjct 42242 TTTTCAATCGTATCCGATGCCTCAACTTCGAGAGTTATAGTCTTGCCTGTCAACGTCTTA 42301 Query 134700 ACGAAAATTTGCATT 134714 ||||||||||||||| Sbjct 42302 ACGAAAATTTGCATT 42316 >seq3649 Length=11525 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/141 (77%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 134577 GCAAA-AATCAA-ACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTT 134634 ||||| || ||| ||||||||| || ||||| || || ||||| ||||||||||| | Sbjct 8655 GCAAACAAACAAGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTAGCCT 8596 Query 134635 TGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 |||| | | |||| || || || | || || |||||||| || || || || || || Sbjct 8595 TGAC-GTTTTCAATCGTATCCGATGCCTCAACCTCGAGAGTGATAGTCTTGCCTGTCAAC 8537 Query 134694 GTTTTAACGAAAATTTGCATT 134714 || |||||||||||||||||| Sbjct 8536 GTCTTAACGAAAATTTGCATT 8516 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639 |||| ||| ||||||||||| || || ||||| || || ||||||||||| ||||| Sbjct 8922 AAAACCAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACA 8863 Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 || | ||||| || | || || || ||||| || || ||||| || |||||||| Sbjct 8862 TTTTCAATCGTGTCAGATGCCTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTTTTG 8803 Query 134700 ACGAAAATTTGCATT 134714 || || ||||||||| Sbjct 8802 ACAAAGATTTGCATT 8788 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 134578 CAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGA 134637 || ||| ||| |||||||| || ||||| || ||||| || ||||||||||| || | Sbjct 8108 CACAAACCAAGCGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAA 8049 Query 134638 CCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTT 134697 | || | |||||| || | ||| || || ||||| ||||| || || || || |||| Sbjct 8048 CATTTTCAATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTTT 7989 Query 134698 TAACGAAAATTTGCATTTT 134716 | ||||| || ||||| || Sbjct 7988 TTACGAAGATCTGCATATT 7970 >seq696 Length=56493 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 || ||||||||| ||||| ||||| || || ||||| |||||||||||| || || Sbjct 4020 AACCAAACGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATT 3961 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | || || || | || || ||||||||||| ||||| ||||| | ||| || || Sbjct 3960 CTCAATGGTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTAC 3901 Query 134702 GAAAATTTGCATTTT 134716 ||||| ||||| || Sbjct 3900 AAAAATCTGCATATT 3886 >seq32 Length=201840 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 || ||||||||| ||||| ||||| || || ||||| |||||||||||| || || Sbjct 46644 AACCAAACGCTGTTGATCAGGCGGGATACCCTCTTTATCTTGAATTTTTGCCTTAACATT 46703 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | || || || | || || ||||||||||| ||||| ||||| | ||| || || Sbjct 46704 CTCAATGGTATCAGAAGCCTCAACCTCGAGAGTAATAGTTTTTCCGGTGAGAGTCTTTAC 46763 Query 134702 GAAAATTTGCATTTT 134716 ||||| ||||| || Sbjct 46764 AAAAATCTGCATATT 46778 >seq8938 Length=3098 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 ||| || |||||||||||| || || || || || || || ||||| || ||| || Sbjct 1629 AAACCAGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACAT 1570 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 || | || || || | |||||| || ||||| || |||||||| || |||||||| | Sbjct 1569 TCTCAATAGTATCCGAGGCTTCCACTTCAAGAGTGATAGTTTTACCAGTCAAAGTTTTGA 1510 Query 134701 CGAAAATTTGCATT 134714 | |||||||||||| Sbjct 1509 CAAAAATTTGCATT 1496 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 134578 CAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGA 134637 || ||| |||||||||||| || ||||| || ||||| || ||||||||||| || | Sbjct 1355 CACAAACCAAACGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAA 1296 Query 134638 CCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTT 134697 | || | ||| || || | ||| || || ||||| ||||| || || || || || | Sbjct 1295 CATTTTCAATTGTATCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCT 1236 Query 134698 TAACGAAAATTTGCATTTT 134716 | ||||| || ||||| || Sbjct 1235 TTACGAAGATCTGCATATT 1217 >seq5909 Length=5756 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 || || |||||||||||| || || || ||||| || |||||||| || ||||| Sbjct 3775 AACCAGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTT 3834 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | ||||| || | ||| || ||||| || || || || || || |||||||| || Sbjct 3835 TTCGATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCAC 3894 Query 134702 GAAAATTTGCATT 134714 ||| ||||||||| Sbjct 3895 GAAGATTTGCATT 3907 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 134579 AAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| ||| || |||||||| || || || ||||| || |||||||| || ||||| Sbjct 4313 AAAAACCAATCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGAC 4372 Query 134639 CGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTT 134698 || | ||||| || | ||| || ||||| || ||||| || || || | ||| || Sbjct 4373 GTTTTCGATAGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTT 4432 Query 134699 AACGAAAATTTGCAT 134713 ||||||||| ||||| Sbjct 4433 AACGAAAATCTGCAT 4447 >seq2189 Length=22760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 ||| ||||||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct 5995 AAACCAAACGCTGTTGATCCGGCGGAATGCCCTCCTTATCTTGAATCTTGGCCTTAACAT 5936 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 || | ||||| |||| || || || || ||||| || || ||||||||||| || | Sbjct 5935 TTTCAATCGTGTCAGACGCCTCAACTTCAAGCGTAATAGTCTTTCCGGTTAAAGTCTTGA 5876 Query 134701 CGAAAATTTGCAT 134713 | ||||| ||||| Sbjct 5875 CAAAAATCTGCAT 5863 >seq1361 Length=35035 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 || || |||||||||||| || || || ||||| || |||||||| || ||||| Sbjct 29472 AACCAGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTT 29531 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | ||||| || | ||| || ||||| || || || || || || |||||||| || Sbjct 29532 TTCGATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCAC 29591 Query 134702 GAAAATTTGCATT 134714 ||| ||||||||| Sbjct 29592 GAAGATTTGCATT 29604 >seq1136 Length=40351 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 || || |||||||||||| || || || ||||| || |||||||| || ||||| Sbjct 25924 AACCAGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTT 25983 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | ||||| || | ||| || ||||| || || || || || || |||||||| || Sbjct 25984 TTCGATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCAC 26043 Query 134702 GAAAATTTGCATT 134714 ||| ||||||||| Sbjct 26044 GAAGATTTGCATT 26056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639 |||| ||| ||||||||||| ||||| |||||||| || |||||||||||| || || Sbjct 26734 AAAACCAATCGCTGCTGATCAGGCGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACA 26793 Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 || | || || || | || || || ||||| || ||||| || || | ||| || Sbjct 26794 TTTTCGATGGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTT 26853 Query 134700 ACGAAAATTTGCATTTTG 134717 ||||| || ||||| ||| Sbjct 26854 ACGAAGATCTGCATATTG 26871 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 134579 AAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| ||| || |||||||| || || || ||||| || |||||||| || ||||| Sbjct 26462 AAAAACCAATCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGAC 26521 Query 134639 CGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTT 134698 || | ||||| || | ||| || ||||| || ||||| || || || | ||| || Sbjct 26522 GTTTTCGATAGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTT 26581 Query 134699 AACGAAAATTTGCAT 134713 ||||||||| ||||| Sbjct 26582 AACGAAAATCTGCAT 26596 >seq293 Length=88462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 ||| ||||||||| ||||| ||||| ||||| || || |||||||| || || || Sbjct 65913 AAACCAAACGCTGTTGATCCGGCGGAATGCCCTCCTTATCTTGAATCTTGGCCTTAACAT 65972 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 || | ||||| |||| || || || || ||||| || || ||||||||||| || | Sbjct 65973 TTTCAATCGTGTCAGACGCCTCAACTTCAAGCGTAATAGTCTTTCCGGTTAAAGTCTTGA 66032 Query 134701 CGAAAATTTGCAT 134713 | ||||| ||||| Sbjct 66033 CAAAAATCTGCAT 66045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505322015349320