Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq481 82.4 1e-10 >seq481 Length=69973 Score = 82.4 bits (90), Expect = 1e-10 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 ||||| ||||||||||| || | ||| || ||| || | || || |||||||| | | Sbjct 27346 GCATCGATCTCATCAATAAAAAGAATGCAAGGTGACTTCTTCCGTGCCATTTCAAACATA 27405 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAG-AGCA 11748 || | || | | || || ||||||||||||||||| | || | || | ||| | || Sbjct 27406 TCCCTCACACGTCCGGGGCCAACACCAACAAACATCTCAAGGAATTCTGAGCCAGAAACA 27465 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 | |||||| || ||||| | || || || | ||| |||||| | || || || || Sbjct 27466 GT-GATGAAAGGTACATTAGCCTCTCCTGCCGTTGCTTTGGCGAGTAAAGTTTTGCCAGT 27524 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCC 11835 ||||| ||| | |||||| || || Sbjct 27525 TCCTGGTGGACCAGTGAGAAGAGCACC 27551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627937080813600