Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8938 86.0 5e-12 seq1136 84.2 2e-11 >seq8938 Length=3098 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 44098 TTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGAT 44157 || ||| ||| ||| || | || | ||| |||| |||||||||| |||||||||||| Sbjct 2050 TTCTTAGTTCTCTCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTTTGGAT 1991 Query 44158 GTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 |||||| || ||||| ||| | || || |||||||| || ||||||||| Sbjct 1990 GTTGTAGTCAGCGAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAGATC 1939 >seq1136 Length=40351 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 44209 CAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC- 44267 ||| || |||||||| | ||| | ||||| || ||| ||||| ||| | |||| Sbjct 26200 CAATCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGAC-GTTCT 26258 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||| || | | |||||| || | || |||||||||||||||||||||||||| | Sbjct 26259 CAATGGTATCAGACGCTTCCACTTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACAA 26318 Query 44328 AGATTTGCAT 44337 |||| ||||| Sbjct 26319 AGATCTGCAT 26328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359937352152147