Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3649 89.7 5e-13 >seq3649 Length=11525 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| || |||| || |||||| ||||||||| ||||||||||| | | Sbjct 9057 CCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTATAGTCAGCG 8998 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 || || || |||| || ||||||||||| ||||| ||| Sbjct 8997 AGAGTCCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATC 8959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462234128529200