Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq15692 86.0 1e-11
seq5175 86.0 1e-11
>seq15692
Length=5223
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|||||| | |||||| | ||||||||||| || ||| |||||||| || ||||||
Sbjct 675 GGTAATATAAATGCTCGCCGTGATTGGGGACATGCTCGGGAATATGTTGAGGCAATGTGG 734
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || ||||| |||| || ||||||| ||| |||||||||||
Sbjct 735 ATGATATTACAACATAATGAGCCTGATGATTTTGTTATTGCTACAGG 781
>seq5175
Length=12175
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|||||| | |||||| | ||||||||||| || ||| |||||||| || ||||||
Sbjct 1804 GGTAATATAAATGCTCGCCGTGATTGGGGACATGCTCGGGAATATGTTGAGGCAATGTGG 1863
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || ||||| |||| || ||||||| ||| |||||||||||
Sbjct 1864 ATGATATTACAACATAATGAGCCTGATGATTTTGTTATTGCTACAGG 1910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807238830155960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |