Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq19449 118 2e-21
seq695 114 2e-20
seq2634 111 3e-19
seq27424 109 1e-18
seq8650 109 1e-18
seq7966 109 1e-18
seq5142 107 4e-18
seq10902 100 5e-16
seq18458 98.7 2e-15
seq3965 98.7 2e-15
seq5365 96.9 6e-15
seq567 96.9 6e-15
seq6254 91.5 3e-13
seq20751 89.7 9e-13
seq6556 89.7 9e-13
seq1266 89.7 9e-13
seq16244 87.8 3e-12
seq8275 86.0 1e-11
>seq19449
Length=4096
Score = 118 bits (130), Expect = 2e-21
Identities = 123/159 (77%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || ||||||||||| ||||| ||||| | ||| || || || || || || |||
Sbjct 998 CCATCCTCCAACTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 939
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG-CTGATTCTACTTCCAAGGT 68422
|| || || ||||| |||||||| |||||||||||| | ||| | | || ||||||||
Sbjct 938 TTCTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACTGCTCC-ACATCCAAGGT 880
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || ||||| || ||||| || | |||||
Sbjct 879 GATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 841
>seq695
Length=26773
Score = 114 bits (126), Expect = 2e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || ||||| ||||| ||||| |||||||| ||||||||| ||| ||
Sbjct 12724 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 12665
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||| || | | ||| ||||| | |||||| || ||||||||||||||||| || || ||
Sbjct 12664 GGTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 12605
Query 68456 CTGCAT 68461
||||||
Sbjct 12604 CTGCAT 12599
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || ||||| |||||||| ||||||||||| ||||||||| |||||
Sbjct 12453 TCGTTGCTGATCAGGCGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGAT 12394
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||||| | | || ||||| | |||||||| ||||| || || ||||| ||||| ||
Sbjct 12393 AGTGTCAGAAGCCTCAACTTCGAGAGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAAAT 12334
Query 68456 CTGCAT 68461
||||||
Sbjct 12333 CTGCAT 12328
Score = 104 bits (114), Expect = 4e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 12178 TGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATGGTA 12119
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | || ||||| | ||||| |||||||| || || ||||| ||||| ||||||
Sbjct 12118 TCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTTACGAAGATCTGC 12059
Query 68460 AT 68461
||
Sbjct 12058 AT 12057
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||| |||||||| ||||||||||| ||||||||| ||||| |||
Sbjct 12993 TGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTG 12934
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | ||| ||||| | |||||| || || || || | || || ||||| || |||
Sbjct 12933 TCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAGATTTGC 12874
Query 68460 ATT 68462
|||
Sbjct 12873 ATT 12871
>seq2634
Length=16880
Score = 111 bits (122), Expect = 3e-19
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || ||||| ||||| ||||| |||||||| ||||||||| ||| ||
Sbjct 1365 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 1424
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||| || | | ||| ||||| | ||||| || ||||||||||||||||| || || ||
Sbjct 1425 GGTATCAGACGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 1484
Query 68456 CTGCAT 68461
||||||
Sbjct 1485 CTGCAT 1490
Score = 107 bits (118), Expect = 4e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 1908 TGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATGGTA 1967
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | || ||||| | ||||| |||||||| || || ||||||||||| ||||||
Sbjct 1968 TCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATCTGC 2027
Query 68460 AT 68461
||
Sbjct 2028 AT 2029
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || ||||| |||||||| ||||||||||| ||||||||| |||||
Sbjct 1633 TCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGAT 1692
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||||| | | ||| ||||| | |||||||| ||||| || || ||||| || || ||
Sbjct 1693 AGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACAAAAAT 1752
Query 68456 CTGCAT 68461
||||||
Sbjct 1753 CTGCAT 1758
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||| |||||||| ||||||||||| ||||||||| ||||| |||
Sbjct 1096 TGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTG 1155
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | ||| ||||| | |||||| || || || || | || || ||||| || |||
Sbjct 1156 TCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAGATTTGC 1215
Query 68460 ATT 68462
|||
Sbjct 1216 ATT 1218
>seq27424
Length=2520
Score = 109 bits (120), Expect = 1e-18
Identities = 139/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336
|| || || || ||||| | || | ||||| || || |||||||| ||||| |||||
Sbjct 367 TGAATATTGTAGTCGGATAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 426
Query 68337 CTTTGTTGGTC--GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGA 68394
| ||| || || ||| || || || ||||| || || ||||| |||||||| ||||
Sbjct 427 CGTTGCTGCTCCCGGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGA 486
Query 68395 TGGTGTCTG-CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
||||||| | ||| || || ||||||||||| || || || ||||| || ||||| ||
Sbjct 487 TGGTGTCCGACTG-CTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAG 545
Query 68454 ATCTGCAT 68461
| |||||
Sbjct 546 ACTTGCAT 553
>seq8650
Length=8768
Score = 109 bits (120), Expect = 1e-18
Identities = 121/159 (76%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || || |||||||| ||||| ||||| | ||| || || || || || || |||
Sbjct 4663 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 4604
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG-CTGATTCTACTTCCAAGGT 68422
|| || || ||||| |||||||| ||||||||||| | ||| | | || ||||||||
Sbjct 4603 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCC-ACATCCAAGGT 4545
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || ||||| || ||||| || | |||||
Sbjct 4544 GATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 4506
Score = 89.7 bits (98), Expect = 9e-13
Identities = 100/130 (77%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG-TCGGGTGGAATGCCTTC 68362
||||| || || |||||||| ||||| ||||| | ||| ||| || || || || || ||
Sbjct 5043 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGGCTCCGGGGGGATCCCCTC 4984
Query 68363 CTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG-CTGATTCTACTTCCAAGG 68421
||| || || ||||| |||||||| ||||||||||| | ||| | | || |||||||
Sbjct 4983 CTTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCC-ACATCCAAGG 4925
Query 68422 TGATGGTTTT 68431
|||| || ||
Sbjct 4924 TGATCGTCTT 4915
>seq7966
Length=9287
Score = 109 bits (120), Expect = 1e-18
Identities = 121/159 (76%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || || |||||||| ||||| ||||| | ||| || || || || || || |||
Sbjct 5180 CCATCCTCCAATTGCTTCCCTGCGAAGATGAGACGTTGCTGCTCCGGGGGGATCCCCTCC 5239
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG-CTGATTCTACTTCCAAGGT 68422
|| || || ||||| |||||||| ||||||||||| | ||| || || ||||||||
Sbjct 5240 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTG-CTCCACATCCAAGGT 5298
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || ||||| || ||||| || | |||||
Sbjct 5299 GATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 5337
>seq5142
Length=12213
Score = 107 bits (118), Expect = 4e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 7448 TGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGATGGTA 7507
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | || ||||| | ||||| |||||||| || || ||||||||||| ||||||
Sbjct 7508 TCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGATCTGC 7567
Query 68460 AT 68461
||
Sbjct 7568 AT 7569
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || ||||| |||||||| ||||||||||| ||||||||| |||||
Sbjct 7173 TCGTTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGAT 7232
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||||| | | ||| ||||| | |||||||| ||||| || || ||||| || || ||
Sbjct 7233 AGTGTCAGAAGCTTCAACTTCGAGTGTGATGGTCTTTCCAGTAAGAGTCTTAACAAAAAT 7292
Query 68456 CTGCAT 68461
||||||
Sbjct 7293 CTGCAT 7298
Score = 96.9 bits (106), Expect = 6e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 68336 TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGAT 68395
|| ||| || || || || || ||||| ||||| |||||||| ||||||||| || ||
Sbjct 6905 TCGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTTTCAAT 6964
Query 68396 GGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
||| || | | ||| ||||| | ||||| || ||||||||||||||||| || || |
Sbjct 6965 GGTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGGT 7024
Query 68456 CTGCAT 68461
||||||
Sbjct 7025 CTGCAT 7030
Score = 87.8 bits (96), Expect = 3e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || |||||||||||||||||||| ||||| || |||||||| || || |||
Sbjct 6638 TGCTGATCTGGTGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTTTCTATAGTG 6697
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | || || ||||| | |||||| || || || || | || || ||||| || |||
Sbjct 6698 TCAGATGCCTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAGATTTGC 6757
Query 68460 ATT 68462
|||
Sbjct 6758 ATT 6760
>seq10902
Length=7311
Score = 100 bits (110), Expect = 5e-16
Identities = 119/159 (75%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || || || ||||| ||||| || || | ||| || || || || || || |||
Sbjct 5955 CCATCCTCCAATTGTTTCCCTGCGAAGATTAGACGTTGCTGCTCCGGGGGGATCCCCTCC 5896
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG-CTGATTCTACTTCCAAGGT 68422
|| || || ||||| |||||||| ||||||||||| | ||| | | || ||||||||
Sbjct 5895 TTCTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCCGACTGCTCC-ACATCCAAGGT 5837
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || ||||| || ||||| || | |||||
Sbjct 5836 GATCGTCTTCCCTGTGAGCGTTTTGACAAAGACTTGCAT 5798
>seq18458
Length=4373
Score = 98.7 bits (108), Expect = 2e-15
Identities = 178/271 (66%), Gaps = 42/271 (15%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || || |
Sbjct 3903 TCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGC 3962
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA---------TGAGTCT------ 68338
||| || | ||||| || | |||||| || ||||| | |||| ||
Sbjct 3963 GAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCTGAAAATTGAGACTAAGAAA 4022
Query 68339 ---------------------------TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
|| || || || ||||| || |||||||||||
Sbjct 4023 CTGTTAAATAAAAAAATAAACCAAGCGCTGCTGATCTGGCGGAATCCCCTCCTTGTCTTG 4082
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431
||| || |||||||| || || ||||| | || || ||||| | ||||| || ||
Sbjct 4083 AATTTTGGCCTTGACATTTTCAATCGTGTCAGATGCCTCAACTTCAAGAGTGATAGTCTT 4142
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || | |||||||| || || ||||||
Sbjct 4143 TCCAGTTAAAGTCTTGACAAAGATTTGCATT 4173
>seq3965
Length=13966
Score = 98.7 bits (108), Expect = 2e-15
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || || |
Sbjct 865 TCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGC 924
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATAT 68332
||| || | ||||| || | |||||| || ||||| ||
Sbjct 925 GAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGAT 963
>seq5365
Length=11941
Score = 96.9 bits (106), Expect = 6e-15
Identities = 178/272 (65%), Gaps = 43/272 (16%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || || |
Sbjct 553 TCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGC 494
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAA-----------TATGAGT------ 68336
||| || | ||||| || | |||||| || || || || || |
Sbjct 493 GAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAGATCTGAAAATTAAGATTAAGAAA 434
Query 68337 --------------------------CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370
| || || || ||||||||||| ||||||||||
Sbjct 433 CTGTCAAACAATAAAATAAAACCAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTT 374
Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430
|||| || |||||||| || || ||||| | || || ||||| | || || || |
Sbjct 373 GAATTTTGGCCTTGACATTTTCAATCGTGTCAGATGCCTCAACTTCAAGAGTTATAGTCT 314
Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || || || ||||| || |||||||||
Sbjct 313 TTCCAGTCAGAGTTTTGACAAAGATCTGCATT 282
>seq567
Length=28520
Score = 96.9 bits (106), Expect = 6e-15
Identities = 178/272 (65%), Gaps = 43/272 (16%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || || |
Sbjct 7599 TCCTCCGCGAAGACGCAAGACCAAGTGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGC 7540
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAA-----------TATGAGT------ 68336
||| || | ||||| || | |||||| || || || || || |
Sbjct 7539 GAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAGATCTGAAAATTAAGATTAAGAAA 7480
Query 68337 --------------------------CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370
| || || || ||||||||||| ||||||||||
Sbjct 7479 CTGTCAAACAATAAAATAAAACCAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTT 7420
Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430
|||| || |||||||| || || ||||| | || || ||||| | || || || |
Sbjct 7419 GAATTTTGGCCTTGACATTTTCAATCGTGTCAGATGCCTCAACTTCAAGAGTTATAGTCT 7360
Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| || || || ||||| || |||||||||
Sbjct 7359 TTCCAGTCAGAGTTTTGACAAAGATCTGCATT 7328
Score = 89.7 bits (98), Expect = 9e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| ||||| || || || ||||||||||||||||| || ||||| || || || |||
Sbjct 6637 TGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATTGTG 6578
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | ||| ||||| | |||||||| ||||| || | ||||| ||||| ||||||
Sbjct 6577 TCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATCTGC 6518
Query 68460 AT 68461
||
Sbjct 6517 AT 6516
>seq6254
Length=10896
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||| |||||||| ||||||||||| ||||||||| ||||| |||
Sbjct 10595 TGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTG 10654
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | ||| ||||| | |||||| || || || || | || || ||||| || |||
Sbjct 10655 TCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAGATTTGC 10714
Query 68460 ATT 68462
|||
Sbjct 10715 ATT 10717
>seq20751
Length=3780
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||||
Sbjct 1245 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 1186
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 1185 CCCGCATCGGGC 1174
>seq6556
Length=10579
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||||
Sbjct 5987 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 6046
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 6047 CCCGCATCGGGC 6058
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||||
Sbjct 8103 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 8044
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 8043 CCCGCATCGGGC 8032
>seq1266
Length=22135
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||||
Sbjct 17855 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 17914
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 17915 CCCGCATCGGGC 17926
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||||
Sbjct 20438 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 20379
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 20378 CCCGCATCGGGC 20367
>seq16244
Length=5026
Score = 87.8 bits (96), Expect = 3e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| || || || ||||| |||||||| ||||||||||| ||||||||| ||||| |||
Sbjct 255 TGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCGATAGTG 196
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | ||| ||||| | |||||| || || || | | || || ||||| || |||
Sbjct 195 TCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCATTCAAAGTTTTCACGAAGATTTGC 136
Query 68460 ATT 68462
|||
Sbjct 135 ATT 133
>seq8275
Length=9039
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
||||| || ||||||||||| ||||| ||||||||||| ||||| || || || |||
Sbjct 4087 TGTTGATCCGGTGGAATGCCCTCCTTATCTTGAATCTTGGCCTTAACATTTTCAATCGTG 4028
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | || || ||||| | || || || ||||| || | || ||||| || ||||||
Sbjct 4027 TCGGATGCCTCAACTTCAAGCGTAATAGTCTTTCCGGTTAAAGTTTTGACAAAAATCTGC 3968
Query 68460 AT 68461
||
Sbjct 3967 AT 3966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921261342904520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |