Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq19449 122 2e-22
seq10902 113 1e-19
seq8650 113 1e-19
seq7966 113 1e-19
seq6254 111 3e-19
seq2634 111 3e-19
seq695 111 3e-19
seq567 109 1e-18
seq16244 107 4e-18
seq27424 105 1e-17
seq3965 104 5e-17
seq22378 102 2e-16
seq5142 102 2e-16
seq5365 96.9 8e-15
seq18458 93.3 9e-14
>seq19449
Length=4096
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | |||||| ||||||||||| ||
Sbjct 1025 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAACTGCTTCCCTGCGAAGATGAGA 966
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| ||||| |||
Sbjct 965 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 906
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 905 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 846
Query 195136 TGCAT 195140
|||||
Sbjct 845 TGCAT 841
>seq10902
Length=7311
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| ||||| | || | ||||| || | || || ||||||||||| ||
Sbjct 5982 TGAATATTGTAGTCGGCCAACGTACGACCATCCTCCAATTGTTTCCCTGCGAAGATTAGA 5923
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 5922 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 5863
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 5862 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 5803
Query 195136 TGCAT 195140
|||||
Sbjct 5802 TGCAT 5798
>seq8650
Length=8768
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 4690 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 4631
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 4630 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 4571
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 4570 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 4511
Query 195136 TGCAT 195140
|||||
Sbjct 4510 TGCAT 4506
Score = 89.7 bits (98), Expect = 1e-12
Identities = 114/156 (73%), Gaps = 1/156 (1%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 5070 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 5011
Query 195016 CGTTGTTGG-TCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||||| ||| || || || || || || || || || || || |||||| || || ||
Sbjct 5010 CGTTGCTGGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGAT 4951
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||||||||| ||||| || | ||| | ||||||
Sbjct 4950 GGTGTCCGACTGCTCCACATCCAAGGTGATCGTCTT 4915
>seq7966
Length=9287
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 5153 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 5212
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 5213 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 5272
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 5273 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 5332
Query 195136 TGCAT 195140
|||||
Sbjct 5333 TGCAT 5337
>seq6254
Length=10896
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 10589 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 10648
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 10649 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAG 10708
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 10709 ATTTGCATT 10717
>seq2634
Length=16880
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 1090 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 1149
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 1150 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 1209
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 1210 ATTTGCATT 1218
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
|||||| || || |||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 1365 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 1424
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || || ||||||||| || || | |||||||| || | || || || || |
Sbjct 1425 GGTATCAGACGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 1484
Query 195135 TTGCAT 195140
|||||
Sbjct 1485 CTGCAT 1490
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 1904 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 1963
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 1964 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 2023
Query 195135 TTGCAT 195140
|||||
Sbjct 2024 CTGCAT 2029
>seq695
Length=26773
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 12999 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 12940
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 12939 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAG 12880
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 12879 ATTTGCATT 12871
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 12182 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 12123
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| |||||||| |
Sbjct 12122 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTTACGAAGAT 12063
Query 195135 TTGCAT 195140
|||||
Sbjct 12062 CTGCAT 12057
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
|||||| || || |||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 12724 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 12665
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || || ||||||||| ||||| | |||||||| || | || || || || |
Sbjct 12664 GGTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 12605
Query 195135 TTGCAT 195140
|||||
Sbjct 12604 CTGCAT 12599
>seq567
Length=28520
Score = 109 bits (120), Expect = 1e-18
Identities = 170/255 (67%), Gaps = 41/255 (16%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||||||||| || || || ||||| |||||||| ||||| || ||||| || | || ||
Sbjct 7313 CAAAACAAGATGGAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTACGACCGTC 7254
Query 194988 TTCGAGCTGCTTACCTGCGAAGAT------------------------------------ 195011
||||||||| ||||| ||||||||
Sbjct 7253 TTCGAGCTGTTTACCAGCGAAGATCTAAAAACATGAAAAGTCAGAATTAGACAGGGCAAA 7194
Query 195012 -----AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
||| || || |||||||| ||||| || ||||||||||||||||| |||||||
Sbjct 7193 CAAACAAGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTAGCCTTGACG 7134
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| ||||| || ||||| || || || || || | ||||| |||||||| || ||
Sbjct 7133 TTTTCAATCGTATCCGATGCCTCAACCTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTA 7074
Query 195127 ACGAACACTTGCATT 195141
||||| | |||||||
Sbjct 7073 ACGAAAATTTGCATT 7059
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| |||||||| || |||||||||||||| |||||| || |||||
Sbjct 7453 CGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 7394
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| || | |||||||| |||| |||||| || || |
Sbjct 7393 GTGTCAGATGCCTCAACTTCAAGAGTTATAGTCTTTCCAGTCAGAGTTTTGACAAAGATC 7334
Query 195136 TGCATT 195141
||||||
Sbjct 7333 TGCATT 7328
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || ||||| || || || ||||| |||||||||||||| ||| || || |||||
Sbjct 6640 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATT 6581
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || ||| |||||||| || | |||||||| ||||| || |||||||| |
Sbjct 6580 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 6521
Query 195136 TGCAT 195140
|||||
Sbjct 6520 TGCAT 6516
>seq16244
Length=5026
Score = 107 bits (118), Expect = 4e-18
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 261 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 202
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || |||||||||| |||||
Sbjct 201 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCATTCAAAGTTTTCACGAAG 142
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 141 ATTTGCATT 133
>seq27424
Length=2520
Score = 105 bits (116), Expect = 1e-17
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| |||| | || | ||||| || | ||||| ||||||||||| ||
Sbjct 367 TGAATATTGTAGTCGGATAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 426
Query 195016 CGTTGTTGGTCT--GGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAA 195073
||||| || || || || || || || || || || || || |||||| || || |
Sbjct 427 CGTTGCTGCTCCCGGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGA 486
Query 195074 TGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACA 195133
|||||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |
Sbjct 487 TGGTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGA 546
Query 195134 CTTGCAT 195140
|||||||
Sbjct 547 CTTGCAT 553
>seq3965
Length=13966
Score = 104 bits (114), Expect = 5e-17
Identities = 169/256 (66%), Gaps = 42/256 (16%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||||||||| || || || ||||| |||||||| ||||| || ||||| || | || ||
Sbjct 1151 CAAAACAAGATGGAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTACGACCGTC 1210
Query 194988 TTCGAGCTGCTTACCTGCGAAGATA----------------------------------- 195012
||||||||| ||||| ||||||||
Sbjct 1211 TTCGAGCTGTTTACCAGCGAAGATCTAAAAACATGAAAAGATAAGAATTAGAAAGGGCAA 1270
Query 195013 -------AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGAC 195065
|| || || |||||||| ||||| || ||||||||||||||||| |||||
Sbjct 1271 ACAAACCAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGAC 1330
Query 195066 GTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTT 195125
||| ||||| || ||||| || ||||| || || | ||||| |||||||| || ||
Sbjct 1331 GTTTTCAATCGTATCCGATGCCTCAACTTCGAGAGTTATAGTCTTGCCTGTCAACGTCTT 1390
Query 195126 TACGAACACTTGCATT 195141
||||| | |||||||
Sbjct 1391 AACGAAAATTTGCATT 1406
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| ||||| || || |||||||||||||| |||||| || |||||
Sbjct 1011 CGCTGCTGATCTGGCGGAATCCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 1070
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| |||| |||||||| || ||||| || || || | |
Sbjct 1071 GTGTCAGATGCCTCAACTTCAAGAGTAATAGTCTTTCCAGTTAAAGTCTTGACAAAGATT 1130
Query 195136 TGCATT 195141
||||||
Sbjct 1131 TGCATT 1136
Score = 93.3 bits (102), Expect = 9e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || || || ||||| || |||||||| |||||||| || || ||||||
Sbjct 1546 AGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATTTTAGCTTTCACATTCTCA 1605
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| || ||||| |||||||||||| || | || || || ||||||||||| || ||
Sbjct 1606 ATAGTATCCGAGGCTTCCACTTCAAGAGTGATAGTTTTACCAGTCAAAGTTTTGACAAAA 1665
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 1666 ATTTGCATT 1674
>seq22378
Length=3416
Score = 102 bits (112), Expect = 2e-16
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || |||||||| ||||| || ||||||||||||||||| |||||||| |||
Sbjct 1539 AGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCA 1598
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| || ||||| || ||||| || || | ||||| |||||||| || || |||||
Sbjct 1599 ATCGTATCCGATGCCTCAACTTCGAGAGTTATAGTCTTGCCTGTCAACGTCTTAACGAAA 1658
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 1659 ATTTGCATT 1667
Score = 98.7 bits (108), Expect = 2e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || || || ||||| || |||||||| |||||||| || |||||||||
Sbjct 1806 AGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATTTTAGCTTTCACGTTCTCA 1865
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| || ||||| |||||||||||| || | || || || ||||||||||| || ||
Sbjct 1866 ATAGTATCCGAGGCTTCCACTTCAAGAGTGATAGTTTTACCAGTCAAAGTTTTGACAAAA 1925
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 1926 ATTTGCATT 1934
>seq5142
Length=12213
Score = 102 bits (112), Expect = 2e-16
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||| ||||||||||| ||||| |||||||| |||||| || ||
Sbjct 6632 AGACGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTTTCT 6691
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| || || ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 6692 ATAGTGTCAGATGCCTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 6751
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 6752 ATTTGCATT 6760
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 7444 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 7503
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 7504 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 7563
Query 195135 TTGCAT 195140
|||||
Sbjct 7564 CTGCAT 7569
Score = 91.5 bits (100), Expect = 3e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
|||| | |||||| || || ||||| || ||||||||||| ||||| || |||||||
Sbjct 6897 AAGACCAATCGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTGACG 6956
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| |||||||| || ||| ||||||||| || || | |||||||| ||
Sbjct 6957 TTTTCAATGGTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCGT 7006
>seq5365
Length=11941
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| |||||||| || |||||||||||||| |||||| || |||||
Sbjct 407 CGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 348
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| || | |||||||| |||| |||||| || || |
Sbjct 347 GTGTCAGATGCCTCAACTTCAAGAGTTATAGTCTTTCCAGTCAGAGTTTTGACAAAGATC 288
Query 195136 TGCATT 195141
||||||
Sbjct 287 TGCATT 282
>seq18458
Length=4373
Score = 93.3 bits (102), Expect = 9e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| ||||| || || |||||||||||||| |||||| || |||||
Sbjct 4048 CGCTGCTGATCTGGCGGAATCCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 4107
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| || | |||||||| || ||||| || || || | |
Sbjct 4108 GTGTCAGATGCCTCAACTTCAAGAGTGATAGTCTTTCCAGTTAAAGTCTTGACAAAGATT 4167
Query 195136 TGCATT 195141
||||||
Sbjct 4168 TGCATT 4173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109036080382547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |