Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2786 132 5e-26 seq3049 131 2e-25 seq27688 116 4e-21 seq13787 105 8e-18 seq27347 102 9e-17 seq9293 102 9e-17 seq20812 96.9 4e-15 seq1624 96.9 4e-15 seq490 95.1 1e-14 seq16867 84.2 2e-11 >seq2786 Length=16508 Score = 132 bits (146), Expect = 5e-26 Identities = 282/427 (66%), Gaps = 43/427 (10%) Strand=Plus/Plus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || |||| | || ||||| Sbjct 4159 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTC 4218 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 4219 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 4278 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||||||||||||||| || |||||||||||||||| || | ||| ||| | Sbjct 4279 ACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAATGA 4338 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174 ||| || ||| || | |||| || ||||||||||| || || || | Sbjct 4339 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 4398 Query 19175 ----CACATGGCATTGTCT---------CTAT-----AGAAT--------------TAAA 19202 | || ||||| | |||| | ||| |||| Sbjct 4399 TTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCTAAA 4458 Query 19203 TAGATACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 | | ||| || ||| || |||||||| ||| | ||| || ||| ||||||| Sbjct 4459 AAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTT 4518 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321 |||||||||||||||| ||||| || |||||||| |||||||| | || |||| ||| | Sbjct 4519 CTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTT 4578 Query 19322 GTACTTC 19328 | ||||| Sbjct 4579 GAACTTC 4585 >seq3049 Length=15854 Score = 131 bits (144), Expect = 2e-25 Identities = 280/421 (67%), Gaps = 37/421 (9%) Strand=Plus/Plus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 13765 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 13824 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 13825 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 13884 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || ||||| |||||||||| || | ||| ||| | Sbjct 13885 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAATGA 13944 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174 ||| || ||| || | |||| || ||||||||||| || || || | Sbjct 13945 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 14004 Query 19175 ----CACATGGCATT----GTCT-----CTAT----AGAAT---------TAAATAGATA 19208 | || ||||| || |||| | ||| |||| | | Sbjct 14005 CTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAGAAGGA 14064 Query 19209 CATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267 ||| || ||| | |||||||| ||| | ||| || ||| ||||||||||||| Sbjct 14065 AATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAAT 14124 Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327 |||||||||| ||||| || |||||||| |||||||| | ||||||| ||| || |||| Sbjct 14125 GAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAACTT 14184 Query 19328 C 19328 | Sbjct 14185 C 14185 >seq27688 Length=2484 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 389 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 330 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 329 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 270 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || ||||| |||||||||| || | ||| ||| | Sbjct 269 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACCAAATGA 210 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTT 19173 ||| || ||| || | |||| || ||||||||||| || || ||| Sbjct 209 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTT 161 >seq13787 Length=5932 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| |||||||| | ||| ||||| || |||| | || ||||||||| ||| | Sbjct 757 ACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTCATTACTTTGTGTCAG 816 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 |||||||| || | ||| |||| ||| || || | |||||| |||||| ||||| Sbjct 817 TCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAAACTTCCAGAGAAGAA 876 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 |||||| || || || |||||||||| || | ||| ||| | ||| || ||| || Sbjct 877 TATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAATGAAGCTTCTTTACTAGC 936 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172 | |||| || ||||||||||| || || || Sbjct 937 AGTCCAACGAAGAGCCCAATCAGCTTTTTTCTT 969 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 |||||||| ||| | ||| || ||| ||||||||||||||||||||||| ||||| Sbjct 1065 ATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAATGAATATTTTCAATAGC 1124 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || |||||||| |||||||| | || |||| ||| || ||||| Sbjct 1125 AATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTTGAACTTC 1169 >seq27347 Length=2531 Score = 102 bits (112), Expect = 9e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 214 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 155 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 154 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 95 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || ||||| |||||||||| || | ||| ||| | Sbjct 94 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAATGA 35 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAA 19158 ||| || ||| || | |||| || |||||| Sbjct 34 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAA 1 >seq9293 Length=8283 Score = 102 bits (112), Expect = 9e-17 Identities = 165/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || ||||| | ||| ||| || |||||||||| Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || || Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| ||||||||||| | | | ||||||| | ||| ||||| Sbjct 5481 TTTGTATAAAGCTTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 5537 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTA 47584 |||| | || | ||||||||| | |||||||| ||||| || | ||| || || | Sbjct 6566 ATCAAACTGCAAAATTCCTTTCTCCACTGGAGAACCTTTATAAGTCTCATATGGTCCAAA 6625 Query 47585 TAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTT 47644 | | | || | |||||| ||||||||||||| |||||| ||||||||||| |||| Sbjct 6626 TTGCTCGGCCAACTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTTG 6685 Query 47645 TATGTTTA 47652 | |||||| Sbjct 6686 TTTGTTTA 6693 >seq20812 Length=3765 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || ||||| | ||| ||| || |||||||||| Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || || Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 968 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 1024 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || || Sbjct 1499 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCAAT 1558 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440 ||| || || || |||| |||||| || ||||| ||||||||||| | |||| ||| Sbjct 1559 AGACTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 1615 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||| ||||| || | | |||||||| ||||| || | ||| || || Sbjct 2129 ATCAAACTGCAAAATGCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 2187 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | ||| | || ||| ||||||||||||| |||||||||||||||||| |||| Sbjct 2188 ATTGCTCAGCCAACTCGCAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 2247 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 2248 GTTTGTTTA 2256 >seq1624 Length=20192 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || || || | ||| ||| || |||||||||| Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | ||| | | |||||| || ||||| || || Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 11813 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 11869 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| |||||||| || || | ||| | ||| ||||| ||| || || || || Sbjct 12336 AACTTGAAAATCTCCAGAAAGAACACGACGACAATAAATATTCGATGTGTAAGGCTCAAT 12395 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443 |||||| || || |||| |||||| || ||||| ||||||||||| | |||| ||| || Sbjct 12396 AGATTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAACAA 12455 Query 47444 GCTATTTCTTACTCCATAT 47462 || || | || ||| || Sbjct 12456 ACTGTTGCGGACACCAAAT 12474 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||||||||| || | | |||||||| ||||| || | ||| || || Sbjct 12898 ATCAAACTGCAAAATTCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 12956 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | || | ||||||| ||||||||||||| |||||| ||||||||||| |||| Sbjct 12957 ATTGCTCTGCCAATTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTT 13016 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 13017 GTTTGTTTA 13025 >seq490 Length=29575 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||||||||| || | | |||||||| ||||| || | ||| || || Sbjct 1807 ATCAAACTGCAAAATTCCTTT-CTCAACTGGAGAACCTTTATAAGTCTCATATGGCCCAA 1865 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | ||| | |||||| ||||||||||||| |||||||||||||||||| |||| Sbjct 1866 ATTGCTCAGCCAACTCACAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 1925 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 1926 GTTTGTTTA 1934 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || ||||| | ||| ||| || |||||||||| Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| ||| ||||||| | | || | | |||||| || ||||| || || Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 534 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 590 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978 |||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | || Sbjct 7966 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 8025 Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038 |||||||||| |||| ||| ||| || | || || ||| || || || |||| |||| Sbjct 8026 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCTACTTCAGCCGCCAAATTATCCAATT 8085 Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067 | ||| ||||| || ||||| || ||| Sbjct 8086 CAACAGTTGTTACTCCAGTATAAATGCCT 8114 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || || Sbjct 1149 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCGAT 1208 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440 ||| || || || |||| |||||| || ||||| ||||||||||| | |||| ||| Sbjct 1209 AGACTCGTTGTTACCAAGAATTTGGGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 1265 >seq16867 Length=4829 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978 |||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | || Sbjct 1898 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 1957 Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038 |||||||||| |||| ||| ||| || | || | ||| || || || |||| |||| Sbjct 1958 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCCACTTCAGCCGCCAAATTATCCAATT 2017 Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067 | ||| ||||| || ||||| || ||| Sbjct 2018 CAACAGTTGTTACTCCAGTATAAATGCCT 2046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561888586851240