Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2786 132 5e-26
seq3049 131 2e-25
seq27688 116 4e-21
seq13787 105 8e-18
seq27347 102 9e-17
seq9293 102 9e-17
seq20812 96.9 4e-15
seq1624 96.9 4e-15
seq490 95.1 1e-14
seq16867 84.2 2e-11
>seq2786
Length=16508
Score = 132 bits (146), Expect = 5e-26
Identities = 282/427 (66%), Gaps = 43/427 (10%)
Strand=Plus/Plus
Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004
||||| || | ||||| |||||||| | ||| ||||| || |||| | || |||||
Sbjct 4159 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTC 4218
Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064
|||| ||| | |||||||| | || | ||| |||| ||| || || | ||||||
Sbjct 4219 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 4278
Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124
|||||||||||||||||| || |||||||||||||||| || | ||| ||| |
Sbjct 4279 ACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAATGA 4338
Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174
||| || ||| || | |||| || ||||||||||| || || || |
Sbjct 4339 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 4398
Query 19175 ----CACATGGCATTGTCT---------CTAT-----AGAAT--------------TAAA 19202
| || ||||| | |||| | ||| ||||
Sbjct 4399 TTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCTAAA 4458
Query 19203 TAGATACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261
| | ||| || ||| || |||||||| ||| | ||| || ||| |||||||
Sbjct 4459 AAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTT 4518
Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321
|||||||||||||||| ||||| || |||||||| |||||||| | || |||| ||| |
Sbjct 4519 CTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTT 4578
Query 19322 GTACTTC 19328
| |||||
Sbjct 4579 GAACTTC 4585
>seq3049
Length=15854
Score = 131 bits (144), Expect = 2e-25
Identities = 280/421 (67%), Gaps = 37/421 (9%)
Strand=Plus/Plus
Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004
||||| || | ||||| |||||||| | ||| ||||| || || | | || |||||
Sbjct 13765 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 13824
Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064
|||| ||| | |||||||| | || | ||| |||| ||| || || | ||||||
Sbjct 13825 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 13884
Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124
|||||| ||||||||||| || ||||| |||||||||| || | ||| ||| |
Sbjct 13885 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAATGA 13944
Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174
||| || ||| || | |||| || ||||||||||| || || || |
Sbjct 13945 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 14004
Query 19175 ----CACATGGCATT----GTCT-----CTAT----AGAAT---------TAAATAGATA 19208
| || ||||| || |||| | ||| |||| | |
Sbjct 14005 CTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAGAAGGA 14064
Query 19209 CATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
||| || ||| | |||||||| ||| | ||| || ||| |||||||||||||
Sbjct 14065 AATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAAT 14124
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
|||||||||| ||||| || |||||||| |||||||| | ||||||| ||| || ||||
Sbjct 14125 GAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAACTT 14184
Query 19328 C 19328
|
Sbjct 14185 C 14185
>seq27688
Length=2484
Score = 116 bits (128), Expect = 4e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004
||||| || | ||||| |||||||| | ||| ||||| || || | | || |||||
Sbjct 389 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 330
Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064
|||| ||| | |||||||| | || | ||| |||| ||| || || | ||||||
Sbjct 329 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 270
Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124
|||||| ||||||||||| || ||||| |||||||||| || | ||| ||| |
Sbjct 269 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACCAAATGA 210
Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTT 19173
||| || ||| || | |||| || ||||||||||| || || |||
Sbjct 209 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTT 161
>seq13787
Length=5932
Score = 105 bits (116), Expect = 8e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019
||| |||||||| | ||| ||||| || |||| | || ||||||||| ||| |
Sbjct 757 ACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTCATTACTTTGTGTCAG 816
Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079
|||||||| || | ||| |||| ||| || || | |||||| |||||| |||||
Sbjct 817 TCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAAACTTCCAGAGAAGAA 876
Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139
|||||| || || || |||||||||| || | ||| ||| | ||| || ||| ||
Sbjct 877 TATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAATGAAGCTTCTTTACTAGC 936
Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172
| |||| || ||||||||||| || || ||
Sbjct 937 AGTCCAACGAAGAGCCCAATCAGCTTTTTTCTT 969
Score = 91.5 bits (100), Expect = 2e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283
|||||||| ||| | ||| || ||| ||||||||||||||||||||||| |||||
Sbjct 1065 ATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAATGAATATTTTCAATAGC 1124
Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
|| |||||||| |||||||| | || |||| ||| || |||||
Sbjct 1125 AATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTTGAACTTC 1169
>seq27347
Length=2531
Score = 102 bits (112), Expect = 9e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004
||||| || | ||||| |||||||| | ||| ||||| || || | | || |||||
Sbjct 214 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 155
Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064
|||| ||| | |||||||| | || | ||| |||| ||| || || | ||||||
Sbjct 154 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 95
Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124
|||||| ||||||||||| || ||||| |||||||||| || | ||| ||| |
Sbjct 94 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAATGA 35
Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAA 19158
||| || ||| || | |||| || ||||||
Sbjct 34 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAA 1
>seq9293
Length=8283
Score = 102 bits (112), Expect = 9e-17
Identities = 165/237 (70%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071
||| || ||||||||||| || ||||| | ||| ||| || ||||||||||
Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360
Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| | ||| | ||| | || || | |||||| | ||| | ||||||||| || || ||
Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || ||
Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245
||| || | ||| ||||||||||| | | | ||||||| | ||| |||||
Sbjct 5481 TTTGTATAAAGCTTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 5537
Score = 82.4 bits (90), Expect = 9e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 47525 ATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTA 47584
|||| | || | ||||||||| | |||||||| ||||| || | ||| || || |
Sbjct 6566 ATCAAACTGCAAAATTCCTTTCTCCACTGGAGAACCTTTATAAGTCTCATATGGTCCAAA 6625
Query 47585 TAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTT 47644
| | | || | |||||| ||||||||||||| |||||| ||||||||||| ||||
Sbjct 6626 TTGCTCGGCCAACTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTTG 6685
Query 47645 TATGTTTA 47652
| ||||||
Sbjct 6686 TTTGTTTA 6693
>seq20812
Length=3765
Score = 96.9 bits (106), Expect = 4e-15
Identities = 164/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071
||| || ||||||||||| || ||||| | ||| ||| || ||||||||||
Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847
Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| | ||| | ||| | || || | |||||| | ||| | ||||||||| || || ||
Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || ||
Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245
||| || | ||| || |||||||| | | | ||||||| | ||| |||||
Sbjct 968 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 1024
Score = 86.0 bits (94), Expect = 7e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383
|| |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || ||
Sbjct 1499 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCAAT 1558
Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440
||| || || || |||| |||||| || ||||| ||||||||||| | |||| |||
Sbjct 1559 AGACTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 1615
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583
|||| | || | ||| ||||| || | | |||||||| ||||| || | ||| || ||
Sbjct 2129 ATCAAACTGCAAAATGCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 2187
Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643
|| | | ||| | || ||| ||||||||||||| |||||||||||||||||| ||||
Sbjct 2188 ATTGCTCAGCCAACTCGCAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 2247
Query 47644 TTATGTTTA 47652
| ||||||
Sbjct 2248 GTTTGTTTA 2256
>seq1624
Length=20192
Score = 96.9 bits (106), Expect = 4e-15
Identities = 164/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071
||| || ||||||||||| || || || | ||| ||| || ||||||||||
Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692
Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| | ||| | ||| | || || | |||||| | ||| | ||||||||| || || ||
Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
||| | | ||| |||| ||||||| | | ||| | | |||||| || ||||| || ||
Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245
||| || | ||| || |||||||| | | | ||||||| | ||| |||||
Sbjct 11813 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 11869
Score = 93.3 bits (102), Expect = 5e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383
|| |||||| |||||||| || || | ||| | ||| ||||| ||| || || || ||
Sbjct 12336 AACTTGAAAATCTCCAGAAAGAACACGACGACAATAAATATTCGATGTGTAAGGCTCAAT 12395
Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443
|||||| || || |||| |||||| || ||||| ||||||||||| | |||| ||| ||
Sbjct 12396 AGATTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAACAA 12455
Query 47444 GCTATTTCTTACTCCATAT 47462
|| || | || ||| ||
Sbjct 12456 ACTGTTGCGGACACCAAAT 12474
Score = 91.5 bits (100), Expect = 2e-13
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583
|||| | || | ||||||||| || | | |||||||| ||||| || | ||| || ||
Sbjct 12898 ATCAAACTGCAAAATTCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 12956
Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643
|| | | || | ||||||| ||||||||||||| |||||| ||||||||||| ||||
Sbjct 12957 ATTGCTCTGCCAATTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTT 13016
Query 47644 TTATGTTTA 47652
| ||||||
Sbjct 13017 GTTTGTTTA 13025
>seq490
Length=29575
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583
|||| | || | ||||||||| || | | |||||||| ||||| || | ||| || ||
Sbjct 1807 ATCAAACTGCAAAATTCCTTT-CTCAACTGGAGAACCTTTATAAGTCTCATATGGCCCAA 1865
Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643
|| | | ||| | |||||| ||||||||||||| |||||||||||||||||| ||||
Sbjct 1866 ATTGCTCAGCCAACTCACAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 1925
Query 47644 TTATGTTTA 47652
| ||||||
Sbjct 1926 GTTTGTTTA 1934
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071
||| || ||||||||||| || ||||| | ||| ||| || ||||||||||
Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413
Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| | ||| | ||| | || || | |||||| | ||| | ||||||||| || || ||
Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
||| | | ||| ||| ||||||| | | || | | |||||| || ||||| || ||
Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245
||| || | ||| || |||||||| | | | ||||||| | ||| |||||
Sbjct 534 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 590
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978
|||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | ||
Sbjct 7966 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 8025
Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038
|||||||||| |||| ||| ||| || | || || ||| || || || |||| ||||
Sbjct 8026 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCTACTTCAGCCGCCAAATTATCCAATT 8085
Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067
| ||| ||||| || ||||| || |||
Sbjct 8086 CAACAGTTGTTACTCCAGTATAAATGCCT 8114
Score = 86.0 bits (94), Expect = 7e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383
|| |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || ||
Sbjct 1149 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCGAT 1208
Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440
||| || || || |||| |||||| || ||||| ||||||||||| | |||| |||
Sbjct 1209 AGACTCGTTGTTACCAAGAATTTGGGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 1265
>seq16867
Length=4829
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978
|||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | ||
Sbjct 1898 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 1957
Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038
|||||||||| |||| ||| ||| || | || | ||| || || || |||| ||||
Sbjct 1958 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCCACTTCAGCCGCCAAATTATCCAATT 2017
Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067
| ||| ||||| || ||||| || |||
Sbjct 2018 CAACAGTTGTTACTCCAGTATAAATGCCT 2046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561888586851240
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