Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq15692 95.1 2e-14
seq5175 95.1 2e-14
seq24931 89.7 7e-13
>seq15692
Length=5223
Score = 95.1 bits (104), Expect = 2e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844
|||||||| |||||||||||||||||||| || | ||||| | || | |||||| |||
Sbjct 784 TTTCCTGTAGCAATAACAAAATCATCAGGCTCATTATGTTGTAATATCATCCACATTGCC 725
Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896
|| ||||| || | ||||||||||| ||||| | |||| | ||| ||||
Sbjct 724 TCAACATATTCCCGAGCATGTCCCCAATCACGGCGAGCATTTATATTACCTA 673
>seq5175
Length=12175
Score = 95.1 bits (104), Expect = 2e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844
|||||||| |||||||||||||||||||| || | ||||| | || | |||||| |||
Sbjct 1913 TTTCCTGTAGCAATAACAAAATCATCAGGCTCATTATGTTGTAATATCATCCACATTGCC 1854
Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896
|| ||||| || | ||||||||||| ||||| | |||| | ||| ||||
Sbjct 1853 TCAACATATTCCCGAGCATGTCCCCAATCACGGCGAGCATTTATATTACCTA 1802
>seq24931
Length=2929
Score = 89.7 bits (98), Expect = 7e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 47785 TTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCC 47844
|||||||| || |||||||||||||||||||| | ||||| | || | |||||| |||
Sbjct 2127 TTTCCTGTAGCGATAACAAAATCATCAGGTTCATTATGTTGTAATATCATCCACATTGCC 2068
Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTA 47896
|| ||||| || | ||||| ||||| ||||| | |||| | ||| ||||
Sbjct 2067 TCAACATATTCCCGAGCATGCCCCCAATCACGGCGAGCATTTATATTACCTA 2016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665233684250120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |