Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq22378 86.0 6e-12
seq3965 86.0 6e-12
>seq22378
Length=3416
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||||||
Sbjct 1933 ATGCAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCG 1874
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||| ||| | || ||| |||||| || ||||||||||| || || ||||||
Sbjct 1873 GATACTATTGAGAACGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAG 1814
Query 25295 CA 25296
||
Sbjct 1813 CA 1812
>seq3965
Length=13966
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||||||
Sbjct 1673 ATGCAAATTTTTGTCAAAACTTTGACTGGTAAAACTATCACTCTTGAAGTGGAAGCCTCG 1614
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||| ||| | || ||| |||||| || ||||||||||| || || ||||||
Sbjct 1613 GATACTATTGAGAATGTGAAAGCTAAAATTCAGGACAAAGAGGGTATTCCACCTGATCAG 1554
Query 25295 CA 25296
||
Sbjct 1553 CA 1552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444920028705120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |