Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq490 138 2e-27 seq16867 134 2e-26 seq1624 134 2e-26 seq30683 129 8e-25 seq2786 125 1e-23 seq3049 123 3e-23 seq27347 113 6e-20 seq27688 109 8e-19 seq20812 102 1e-16 seq13787 96.9 5e-15 seq9293 96.9 5e-15 >seq490 Length=29575 Score = 138 bits (152), Expect = 2e-27 Identities = 205/288 (71%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803 ||||||||||||||||| || || | || || | |||| | ||| || ||| ||||| Sbjct 6648 TTATTTCCTCCCTGATCAATATAGCGTGCCACAG-AATTAAAAACTTGCAACATTGGAAT 6706 Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||| ||||| || || |||||||||||||| || || ||| || ||||| | Sbjct 6707 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 6766 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 ||| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| || Sbjct 6767 AATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 6826 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983 | | || || || || ||| | | ||| ||| | |||||| ||| | ||| | Sbjct 6827 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 6886 Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 | || | || ||||| || ||||| || ||||| |||||||| ||||| Sbjct 6887 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 6934 Score = 111 bits (122), Expect = 2e-19 Identities = 191/275 (69%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| | ||| ||||| || || |||||||| ||| | |||||||||| Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 || | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| ||||| Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 |||| ||| |||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533 Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637 | || ||| | ||||||||| ||||| | | ||||||| | || || ||| Sbjct 534 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 591 Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672 || ||||| | |||||| || | |||| ||| Sbjct 592 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 626 Score = 95.1 bits (104), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| |||| ||||| ||||||||| |||||||| |||||||||||| ||||| Sbjct 5283 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTAGGACATTCATTCGGACA 5342 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||| || ||||| | |||||||| | ||||| |||||||| Sbjct 5343 CATTAAAGACCAAATGTCATCATCTCTCACTCGCTTCATAAA 5384 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 || ||||| | || |||||||||||||||||||| || | || || ||| ||| Sbjct 7337 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 7396 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202 ||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| || Sbjct 7397 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 7455 Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232 | || |||||||| || ||||| ||||| Sbjct 7456 ACGATCATAAATAATTACTGAATTGAGTTT 7485 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| ||||| Sbjct 3727 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTGGGACATTCATTCGGACA 3786 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||| || ||||| | |||||||| | || || |||||||| Sbjct 3787 CATTAAAGACCAAATGTCATCATCTCTCACACGCTTCATAAA 3828 >seq16867 Length=4829 Score = 134 bits (148), Expect = 2e-26 Identities = 204/288 (71%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803 ||||||||||||||||| || || | || || | |||| | ||| || ||| ||||| Sbjct 278 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 336 Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||| ||||| || || |||||||||||||| || || ||| || ||||| | Sbjct 337 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 396 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 ||| || || || |||||||| ||| ||| || || ||||||||| || | ||| || Sbjct 397 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTC 456 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983 | | || || || || ||| | | ||| ||| | |||||| ||| | ||| | Sbjct 457 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 516 Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 | || | || ||||| || ||||| || ||||| |||||||| ||||| Sbjct 517 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 564 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 || ||||| | || |||||||||||||||||||| || | || || ||| ||| Sbjct 970 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 1029 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202 ||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| || Sbjct 1030 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 1088 Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232 | || |||||||| || ||||| ||||| Sbjct 1089 ACGATCATAAATAATTACTGAATTGAGTTT 1118 >seq1624 Length=20192 Score = 134 bits (148), Expect = 2e-26 Identities = 204/288 (71%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803 ||||||||||||||||| || || | || || | |||| | ||| || ||| ||||| Sbjct 16035 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 16093 Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||| ||||| || || |||||||||||||| || || ||| || ||||| | Sbjct 16094 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 16153 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 || || || || |||||||| ||| ||| ||||| ||||||||| || | ||| || Sbjct 16154 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 16213 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983 | | || || || || ||| | | ||| ||| | |||||| ||| | ||| | Sbjct 16214 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 16273 Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 | || | || ||||| || ||||| || ||||| |||||||| ||||| Sbjct 16274 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 16321 Score = 114 bits (126), Expect = 2e-20 Identities = 192/275 (70%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| | ||| ||||| || ||||||||||| ||| | |||||||||| Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 || | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| ||||| Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 |||| ||| ||| | |||||||| ||||| ||| ||||||||||||| ||| Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812 Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637 | || ||| | ||||||||| ||||| | | ||||||| | || || ||| Sbjct 11813 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 11870 Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672 || ||||| | |||||| || | |||| ||| Sbjct 11871 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 11905 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 || ||||| | || |||||||||||||||||||| || | || || ||| ||| Sbjct 16535 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 16594 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202 ||| ||| ||||| ||| ||| || |||||||| |||||||| | || |||||| || Sbjct 16595 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 16653 Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232 | || ||||||||||| ||||| ||||| Sbjct 16654 ACGATCATAAATAATAACTGAATTGAGTTT 16683 >seq30683 Length=2079 Score = 129 bits (142), Expect = 8e-25 Identities = 203/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803 ||||| ||||||||||| || || | || || | |||| | ||| || ||| ||||| Sbjct 617 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGA-ATTAAAAACTTGCAACATTGGAAT 559 Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||| ||||| || || |||||||||||||| || || ||| || ||||| | Sbjct 558 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 499 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923 || || || || |||||||| ||| ||| ||||| ||||||||| || | ||| || Sbjct 498 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 439 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983 | | || || || || ||| | | ||| ||| | |||||| ||| | ||| | Sbjct 438 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 379 Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 | || | || ||||| || ||||| || ||||| |||||||| ||||| Sbjct 378 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 331 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| ||||| Sbjct 1930 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTGGGACATTCATTCGGACA 1871 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||| || ||||| | |||||||| | || || |||||||| Sbjct 1870 CATTAAAGACCAAATGTCATCATCTCTCACACGCTTCATAAA 1829 >seq2786 Length=16508 Score = 125 bits (138), Expect = 1e-23 Identities = 289/440 (66%), Gaps = 49/440 (11%) Strand=Plus/Plus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||||| || | ||| || || || || | ||| || || ||||||| | ||||||| Sbjct 4157 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 4216 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||| ||| ||||||||||| | ||| || || || |||||||| || |||||| Sbjct 4217 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 4276 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774 ||| |||||||||||| || || || ||||||||||| |||| || | || || Sbjct 4277 AAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAAT 4336 Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 | | ||| | | | || |||| | |||||||||||||| ||||| | | || Sbjct 4337 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 4395 Query 39835 CATTGTTTCTATAGCATTAAAGA-----GA---------------TAATGTTTTTCATC- 39873 | | |||||||||||| | || | || ||||| ||| Sbjct 4396 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCT 4455 Query 39874 ------------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACA 39911 || |||||||| ||| ||||| ||||| ||||| Sbjct 4456 AAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACA 4515 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||||||||| || |||||||| || || |||||||| |||||||| | || || | | Sbjct 4516 TTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTA 4575 Query 39972 TTTGTACCTC-TGAACAAAA 39990 |||| || || ||| ||||| Sbjct 4576 TTTGAACTTCTTGAGCAAAA 4595 >seq3049 Length=15854 Score = 123 bits (136), Expect = 3e-23 Identities = 285/434 (66%), Gaps = 43/434 (10%) Strand=Plus/Plus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||||| || | ||| || || || || | ||| || || ||||| | | ||||||| Sbjct 13763 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 13822 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||| ||| ||||||||||| | ||| || || || |||||||| || |||||| Sbjct 13823 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 13882 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774 ||| |||||| ||||| || || || ||||| ||||| |||| ||| | || || Sbjct 13883 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAAT 13942 Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 | | ||| | | | || |||| | |||||||||||||| ||||| | | || Sbjct 13943 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 14001 Query 39835 CATTGTTTCTATAGCATTAAA--------------GAGATAATGTTTTTCATC------- 39873 | |||||||||||| | | || ||||| ||| Sbjct 14002 AAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAGAA 14061 Query 39874 ------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 || |||||||| ||| ||||| ||||| ||||||||||| Sbjct 14062 GGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTG 14121 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 |||| || |||||||| || || |||||||| |||||||| | ||||| | ||||| | Sbjct 14122 AATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAA 14181 Query 39978 CCTC-TGAACAAAA 39990 | || ||| ||||| Sbjct 14182 CTTCTTGAGCAAAA 14195 >seq27347 Length=2531 Score = 113 bits (124), Expect = 6e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||||| || | ||| || || || || | ||| || || ||||| | | ||||||| Sbjct 216 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 157 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||| ||| ||||||||||| | ||| || || || |||||||| || |||||| Sbjct 156 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 97 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| |||||| ||||| || || || ||||| ||||| |||| ||| Sbjct 96 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAG 50 >seq27688 Length=2484 Score = 109 bits (120), Expect = 8e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||||| || | ||| || || || || | ||| || || ||||| | | ||||||| Sbjct 391 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 332 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||| ||| ||||||||||| | ||| || || || |||||||| || |||||| Sbjct 331 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 272 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761 ||| |||||| ||||| || || || ||||| ||||| |||| Sbjct 271 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAA 229 >seq20812 Length=3765 Score = 102 bits (112), Expect = 1e-16 Identities = 189/275 (69%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| | ||| ||||| || || || ||||| ||| | |||||||||| Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 || | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| ||||| Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 |||| ||| ||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967 Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637 | || ||| | ||||||||| ||||| | | ||||||| | || || ||| Sbjct 968 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 1025 Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672 || ||||| | |||||| || | |||| ||| Sbjct 1026 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 1060 >seq13787 Length=5932 Score = 96.9 bits (106), Expect = 5e-15 Identities = 282/441 (64%), Gaps = 50/441 (11%) Strand=Plus/Plus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||| | || | || || || || || | ||| || || ||||||| | ||||||| Sbjct 740 AAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 799 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||| ||| ||||||||||| ||| || || || |||||||| || |||||| Sbjct 800 TCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 859 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774 ||| |||||| ||||| || || || || || ||||| |||| || | || || Sbjct 860 AAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAAT 919 Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 | | ||| | | | || |||| | |||||||||||||| ||||| | | || Sbjct 920 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 978 Query 39835 CATTGTTTCTATAGCATT--------------------AAAGAGATAATGTTTTTCA--- 39871 | | ||||||||| ||| | ||| | ||||| | Sbjct 979 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAATT 1038 Query 39872 ------------------TCACT---ATCTTTAACATATGTATCTATTAACAGACTATAC 39910 ||| | |||||||| ||| ||||| ||||| |||| Sbjct 1039 TAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATAC 1098 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 ||||||||||| || |||||||| || || |||||||| |||||||| | || || | Sbjct 1099 ATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGT 1158 Query 39971 ATTTGTACCTC-TGAACAAAA 39990 ||||| || || ||| ||||| Sbjct 1159 ATTTGAACTTCTTGAGCAAAA 1179 >seq9293 Length=8283 Score = 96.9 bits (106), Expect = 5e-15 Identities = 188/275 (68%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| | ||| ||||| || || || ||||| ||| | |||||||||| Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 || | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| ||||| Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 |||| ||| ||| | |||||||| || || ||| ||||||||||||| ||| Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480 Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637 | || ||| | |||||| || ||||| | | ||||||| | || || ||| Sbjct 5481 TTTGTATAAAGC--TTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 5538 Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672 || ||||| | |||||| || | |||| ||| Sbjct 5539 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 5573 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 69104 CCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAG 69163 |||| || ||||| || || || | ||||| |||||||| |||||||| ||||| || Sbjct 7407 CCTGTACACCAATTCCAATTGGACGATGTCGAAGATTTGAACGTTCAGCTTGTGGAACAG 7466 Query 69164 GATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 |||||||||| ||||| || ||||| || | ||||| Sbjct 7467 GATAATAATTTATATCAATTATTTTGTTCAAATTTC 7502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686639694891240