Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29]
31,341 sequences; 235,798,407 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq490 138 2e-27
seq16867 134 2e-26
seq1624 134 2e-26
seq30683 129 8e-25
seq2786 125 1e-23
seq3049 123 3e-23
seq27347 113 6e-20
seq27688 109 8e-19
seq20812 102 1e-16
seq13787 96.9 5e-15
seq9293 96.9 5e-15
>seq490
Length=29575
Score = 138 bits (152), Expect = 2e-27
Identities = 205/288 (71%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||||||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 6648 TTATTTCCTCCCTGATCAATATAGCGTGCCACAG-AATTAAAAACTTGCAACATTGGAAT 6706
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 6707 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 6766
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
||| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 6767 AATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 6826
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 6827 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 6886
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 6887 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 6934
Score = 111 bits (122), Expect = 2e-19
Identities = 191/275 (69%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || || |||||||| ||| | ||||||||||
Sbjct 354 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 413
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 414 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 473
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 474 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 533
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 534 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 591
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 592 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 626
Score = 95.1 bits (104), Expect = 2e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| |||| ||||| ||||||||| |||||||| |||||||||||| |||||
Sbjct 5283 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTAGGACATTCATTCGGACA 5342
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
||| || ||||| | |||||||| | ||||| ||||||||
Sbjct 5343 CATTAAAGACCAAATGTCATCATCTCTCACTCGCTTCATAAA 5384
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 7337 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 7396
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| ||
Sbjct 7397 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 7455
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || |||||||| || ||||| |||||
Sbjct 7456 ACGATCATAAATAATTACTGAATTGAGTTT 7485
Score = 86.0 bits (94), Expect = 9e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| |||||
Sbjct 3727 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTGGGACATTCATTCGGACA 3786
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
||| || ||||| | |||||||| | || || ||||||||
Sbjct 3787 CATTAAAGACCAAATGTCATCATCTCTCACACGCTTCATAAA 3828
>seq16867
Length=4829
Score = 134 bits (148), Expect = 2e-26
Identities = 204/288 (71%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||||||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 278 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 336
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 337 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 396
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
||| || || || |||||||| ||| ||| || || ||||||||| || | ||| ||
Sbjct 397 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTC 456
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 457 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 516
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 517 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 564
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 970 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 1029
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| ||
Sbjct 1030 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 1088
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || |||||||| || ||||| |||||
Sbjct 1089 ACGATCATAAATAATTACTGAATTGAGTTT 1118
>seq1624
Length=20192
Score = 134 bits (148), Expect = 2e-26
Identities = 204/288 (71%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||||||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 16035 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 16093
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 16094 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 16153
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
|| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 16154 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 16213
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 16214 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 16273
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 16274 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 16321
Score = 114 bits (126), Expect = 2e-20
Identities = 192/275 (70%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || ||||||||||| ||| | ||||||||||
Sbjct 11633 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 11692
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 11693 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 11752
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| ||||| ||| ||||||||||||| |||
Sbjct 11753 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 11812
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 11813 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 11870
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 11871 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 11905
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 16535 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 16594
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || |||||| ||
Sbjct 16595 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 16653
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || ||||||||||| ||||| |||||
Sbjct 16654 ACGATCATAAATAATAACTGAATTGAGTTT 16683
>seq30683
Length=2079
Score = 129 bits (142), Expect = 8e-25
Identities = 203/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||| ||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 617 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGA-ATTAAAAACTTGCAACATTGGAAT 559
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 558 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 499
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
|| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 498 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 439
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 438 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 379
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 378 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 331
Score = 86.0 bits (94), Expect = 9e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| |||||
Sbjct 1930 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTGGGACATTCATTCGGACA 1871
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
||| || ||||| | |||||||| | || || ||||||||
Sbjct 1870 CATTAAAGACCAAATGTCATCATCTCTCACACGCTTCATAAA 1829
>seq2786
Length=16508
Score = 125 bits (138), Expect = 1e-23
Identities = 289/440 (66%), Gaps = 49/440 (11%)
Strand=Plus/Plus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||||| | |||||||
Sbjct 4157 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 4216
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 4217 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 4276
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||||||||| || || || ||||||||||| |||| || | || ||
Sbjct 4277 AAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAAT 4336
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 4337 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 4395
Query 39835 CATTGTTTCTATAGCATTAAAGA-----GA---------------TAATGTTTTTCATC- 39873
| | |||||||||||| | || | || ||||| |||
Sbjct 4396 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCT 4455
Query 39874 ------------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACA 39911
|| |||||||| ||| ||||| ||||| |||||
Sbjct 4456 AAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACA 4515
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
|||||||||| || |||||||| || || |||||||| |||||||| | || || | |
Sbjct 4516 TTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTA 4575
Query 39972 TTTGTACCTC-TGAACAAAA 39990
|||| || || ||| |||||
Sbjct 4576 TTTGAACTTCTTGAGCAAAA 4595
>seq3049
Length=15854
Score = 123 bits (136), Expect = 3e-23
Identities = 285/434 (66%), Gaps = 43/434 (10%)
Strand=Plus/Plus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 13763 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 13822
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 13823 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 13882
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || ||||| ||||| |||| ||| | || ||
Sbjct 13883 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAAT 13942
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 13943 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 14001
Query 39835 CATTGTTTCTATAGCATTAAA--------------GAGATAATGTTTTTCATC------- 39873
| |||||||||||| | | || ||||| |||
Sbjct 14002 AAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTAATCTAAAGAA 14061
Query 39874 ------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917
|| |||||||| ||| ||||| ||||| |||||||||||
Sbjct 14062 GGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTG 14121
Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977
|||| || |||||||| || || |||||||| |||||||| | ||||| | ||||| |
Sbjct 14122 AATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAA 14181
Query 39978 CCTC-TGAACAAAA 39990
| || ||| |||||
Sbjct 14182 CTTCTTGAGCAAAA 14195
>seq27347
Length=2531
Score = 113 bits (124), Expect = 6e-20
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 216 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 157
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 156 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 97
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
||| |||||| ||||| || || || ||||| ||||| |||| |||
Sbjct 96 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAG 50
>seq27688
Length=2484
Score = 109 bits (120), Expect = 8e-19
Identities = 122/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 391 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 332
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 331 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 272
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761
||| |||||| ||||| || || || ||||| ||||| ||||
Sbjct 271 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAA 229
>seq20812
Length=3765
Score = 102 bits (112), Expect = 1e-16
Identities = 189/275 (69%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 788 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 847
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 848 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 907
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 908 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 967
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 968 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 1025
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 1026 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 1060
>seq13787
Length=5932
Score = 96.9 bits (106), Expect = 5e-15
Identities = 282/441 (64%), Gaps = 50/441 (11%)
Strand=Plus/Plus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||| | || | || || || || || | ||| || || ||||||| | |||||||
Sbjct 740 AAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 799
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| ||| || || || |||||||| || ||||||
Sbjct 800 TCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 859
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || || || ||||| |||| || | || ||
Sbjct 860 AAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAAT 919
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 920 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 978
Query 39835 CATTGTTTCTATAGCATT--------------------AAAGAGATAATGTTTTTCA--- 39871
| | ||||||||| ||| | ||| | ||||| |
Sbjct 979 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAATT 1038
Query 39872 ------------------TCACT---ATCTTTAACATATGTATCTATTAACAGACTATAC 39910
||| | |||||||| ||| ||||| ||||| ||||
Sbjct 1039 TAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATAC 1098
Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970
||||||||||| || |||||||| || || |||||||| |||||||| | || || |
Sbjct 1099 ATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGT 1158
Query 39971 ATTTGTACCTC-TGAACAAAA 39990
||||| || || ||| |||||
Sbjct 1159 ATTTGAACTTCTTGAGCAAAA 1179
>seq9293
Length=8283
Score = 96.9 bits (106), Expect = 5e-15
Identities = 188/275 (68%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 5301 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 5360
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 5361 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 5420
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 5421 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 5480
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | |||||| || ||||| | | ||||||| | || || |||
Sbjct 5481 TTTGTATAAAGC--TTTGATGTCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 5538
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 5539 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 5573
Score = 84.2 bits (92), Expect = 3e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 69104 CCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAG 69163
|||| || ||||| || || || | ||||| |||||||| |||||||| ||||| ||
Sbjct 7407 CCTGTACACCAATTCCAATTGGACGATGTCGAAGATTTGAACGTTCAGCTTGTGGAACAG 7466
Query 69164 GATAATAATTAATATCTATAATTTTATTAAGATTTC 69199
|||||||||| ||||| || ||||| || | |||||
Sbjct 7467 GATAATAATTTATATCAATTATTTTGTTCAAATTTC 7502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686639694891240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |